Variant report

Variant rs17494038
Chromosome Location chr18:25626975-25626976
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:25617000-25628800 Enhancers Cortex derived primary cultured neurospheres brain
2 chr18:25618400-25631600 Weak transcription Fetal Brain Male brain
3 chr18:25620400-25627400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr18:25620400-25627600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
5 chr18:25620400-25629200 Weak transcription Left Ventricle heart
6 chr18:25621600-25628200 Weak transcription Fetal Brain Female brain
7 chr18:25621800-25628200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr18:25623600-25627600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr18:25623600-25627600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr18:25624400-25627400 Enhancers HUES48 Cell Line embryonic stem cell
11 chr18:25624800-25627400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr18:25624800-25627400 Enhancers iPS-20b Cell Line embryonic stem cell
13 chr18:25625000-25627400 Enhancers HUES64 Cell Line embryonic stem cell
14 chr18:25625800-25628400 Weak transcription Liver Liver
15 chr18:25625800-25628400 Weak transcription Brain Inferior Temporal Lobe brain
16 chr18:25625800-25628400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr18:25625800-25628600 Weak transcription Fetal Kidney kidney
18 chr18:25625800-25628800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr18:25625800-25630800 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr18:25625800-25643400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr18:25625800-25650400 Weak transcription Right Atrium heart
22 chr18:25626000-25627400 Enhancers HUES6 Cell Line embryonic stem cell
23 chr18:25626000-25627400 Enhancers iPS-18 Cell Line embryonic stem cell
24 chr18:25626000-25627800 Enhancers ES-I3 Cell Line embryonic stem cell
25 chr18:25626000-25628200 Weak transcription Brain Cingulate Gyrus brain
26 chr18:25626000-25628400 Weak transcription H9 Cell Line embryonic stem cell
27 chr18:25626000-25628600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
28 chr18:25626000-25629800 Weak transcription H1 Cell Line embryonic stem cell
29 chr18:25626000-25643200 Weak transcription HUVEC blood vessel
30 chr18:25626200-25627200 Enhancers NH-A brain
31 chr18:25626200-25628200 Weak transcription Brain Angular Gyrus brain
32 chr18:25626200-25628200 Weak transcription Brain Germinal Matrix brain
33 chr18:25626200-25628200 Weak transcription Brain Hippocampus Middle brain
34 chr18:25626200-25628200 Weak transcription Brain Substantia Nigra brain
35 chr18:25626200-25628200 Weak transcription A549 lung
36 chr18:25626200-25628400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr18:25626200-25628400 Weak transcription Muscle Satellite Cultured Cells --
38 chr18:25626200-25628400 Weak transcription Brain Anterior Caudate brain
39 chr18:25626200-25628800 Weak transcription Fetal Heart heart
40 chr18:25626200-25629200 Weak transcription HSMM muscle
41 chr18:25626200-25630800 Weak transcription Osteobl bone
42 chr18:25626600-25628400 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr18:25626800-25627600 Enhancers ES-WA7 Cell Line embryonic stem cell

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