Variant report
| Variant | rs17528077 |
|---|---|
| Chromosome Location | chr1:227192280-227192281 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:227154400-227294200 | Weak transcription | Hela-S3 | cervix |
| 2 | chr1:227175200-227198400 | Weak transcription | A549 | lung |
| 3 | chr1:227175200-227210200 | Weak transcription | HMEC | breast |
| 4 | chr1:227175600-227216200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 5 | chr1:227176000-227216400 | Weak transcription | NHLF | lung |
| 6 | chr1:227177400-227255200 | Weak transcription | Small Intestine | intestine |
| 7 | chr1:227178400-227271200 | Weak transcription | Psoas Muscle | Psoas |
| 8 | chr1:227178600-227206600 | Weak transcription | Primary hematopoietic stem cells | blood |
| 9 | chr1:227178600-227226200 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 10 | chr1:227179400-227198400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 11 | chr1:227179400-227204400 | Weak transcription | Stomach Mucosa | stomach |
| 12 | chr1:227179400-227215000 | Weak transcription | Placenta | Placenta |
| 13 | chr1:227179600-227213800 | Weak transcription | NH-A | brain |
| 14 | chr1:227182000-227216000 | Weak transcription | Colon Smooth Muscle | Colon |
| 15 | chr1:227182200-227205600 | Weak transcription | Fetal Brain Male | brain |
| 16 | chr1:227182600-227206400 | Weak transcription | Brain Germinal Matrix | brain |
| 17 | chr1:227182800-227224200 | Weak transcription | Spleen | Spleen |
| 18 | chr1:227183200-227202600 | Weak transcription | Pancreas | Pancrea |
| 19 | chr1:227183200-227228200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 20 | chr1:227183200-227240400 | Weak transcription | Colonic Mucosa | Colon |
| 21 | chr1:227183600-227204600 | Weak transcription | HepG2 | liver |
| 22 | chr1:227183800-227203000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 23 | chr1:227184000-227203200 | Weak transcription | Brain Substantia Nigra | brain |
| 24 | chr1:227184000-227204200 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 25 | chr1:227184000-227214600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 26 | chr1:227184000-227234000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 27 | chr1:227184200-227206600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 28 | chr1:227184600-227208000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 29 | chr1:227187200-227218600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 30 | chr1:227187800-227192800 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 31 | chr1:227187800-227192800 | Strong transcription | Fetal Muscle Leg | muscle |
| 32 | chr1:227187800-227193400 | Strong transcription | HUVEC | blood vessel |
| 33 | chr1:227187800-227194800 | Strong transcription | Fetal Muscle Trunk | muscle |
| 34 | chr1:227188000-227192800 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 35 | chr1:227188000-227194600 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 36 | chr1:227188200-227192800 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 37 | chr1:227188200-227192800 | Strong transcription | Adipose Nuclei | Adipose |
| 38 | chr1:227188200-227192800 | Strong transcription | Brain Anterior Caudate | brain |
| 39 | chr1:227188200-227192800 | Strong transcription | Brain Inferior Temporal Lobe | brain |
| 40 | chr1:227188200-227192800 | Strong transcription | Duodenum Mucosa | Duodenum |
| 41 | chr1:227188200-227192800 | Strong transcription | Fetal Intestine Large | intestine |
| 42 | chr1:227188200-227192800 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 43 | chr1:227188200-227192800 | Strong transcription | Stomach Smooth Muscle | stomach |
| 44 | chr1:227188200-227193000 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 45 | chr1:227188200-227194400 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 46 | chr1:227188200-227194400 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 47 | chr1:227188400-227192800 | Strong transcription | Duodenum Smooth Muscle | Duodenum |
| 48 | chr1:227188400-227193000 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 49 | chr1:227188400-227193000 | Strong transcription | Fetal Stomach | stomach |
| 50 | chr1:227188600-227192800 | Strong transcription | Fetal Lung | lung |
