The 2.0 version of rSNPBase

Variant report

Variant rs61834000
Chromosome Location chr1:227192028-227192029
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227154400-227294200 Weak transcription Hela-S3 cervix
2 chr1:227175200-227198400 Weak transcription A549 lung
3 chr1:227175200-227210200 Weak transcription HMEC breast
4 chr1:227175600-227216200 Weak transcription H9 Cell Line embryonic stem cell
5 chr1:227176000-227216400 Weak transcription NHLF lung
6 chr1:227177400-227255200 Weak transcription Small Intestine intestine
7 chr1:227178400-227271200 Weak transcription Psoas Muscle Psoas
8 chr1:227178600-227206600 Weak transcription Primary hematopoietic stem cells blood
9 chr1:227178600-227226200 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr1:227179400-227198400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr1:227179400-227204400 Weak transcription Stomach Mucosa stomach
12 chr1:227179400-227215000 Weak transcription Placenta Placenta
13 chr1:227179600-227213800 Weak transcription NH-A brain
14 chr1:227182000-227216000 Weak transcription Colon Smooth Muscle Colon
15 chr1:227182200-227205600 Weak transcription Fetal Brain Male brain
16 chr1:227182600-227206400 Weak transcription Brain Germinal Matrix brain
17 chr1:227182800-227224200 Weak transcription Spleen Spleen
18 chr1:227183200-227202600 Weak transcription Pancreas Pancrea
19 chr1:227183200-227228200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr1:227183200-227240400 Weak transcription Colonic Mucosa Colon
21 chr1:227183600-227204600 Weak transcription HepG2 liver
22 chr1:227183800-227203000 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr1:227184000-227203200 Weak transcription Brain Substantia Nigra brain
24 chr1:227184000-227204200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr1:227184000-227214600 Weak transcription H1 Cell Line embryonic stem cell
26 chr1:227184000-227234000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:227184200-227206600 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr1:227184600-227208000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr1:227187200-227218600 Weak transcription ES-WA7 Cell Line embryonic stem cell
30 chr1:227187800-227192800 Strong transcription Breast Myoepithelial Primary Cells Breast
31 chr1:227187800-227192800 Strong transcription Fetal Muscle Leg muscle
32 chr1:227187800-227193400 Strong transcription HUVEC blood vessel
33 chr1:227187800-227194800 Strong transcription Fetal Muscle Trunk muscle
34 chr1:227188000-227192800 Strong transcription Cortex derived primary cultured neurospheres brain
35 chr1:227188000-227194600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr1:227188200-227192800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr1:227188200-227192800 Strong transcription Adipose Nuclei Adipose
38 chr1:227188200-227192800 Strong transcription Brain Anterior Caudate brain
39 chr1:227188200-227192800 Strong transcription Brain Inferior Temporal Lobe brain
40 chr1:227188200-227192800 Strong transcription Duodenum Mucosa Duodenum
41 chr1:227188200-227192800 Strong transcription Fetal Intestine Large intestine
42 chr1:227188200-227192800 Strong transcription Rectal Mucosa Donor 29 rectum
43 chr1:227188200-227192800 Strong transcription Stomach Smooth Muscle stomach
44 chr1:227188200-227193000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr1:227188200-227194400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr1:227188200-227194400 Strong transcription Fetal Adrenal Gland Adrenal Gland
47 chr1:227188400-227192800 Strong transcription Duodenum Smooth Muscle Duodenum
48 chr1:227188400-227193000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr1:227188400-227193000 Strong transcription Fetal Stomach stomach
50 chr1:227188600-227192800 Strong transcription Fetal Lung lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015