Variant report

Variant	rs17611161
Chromosome Location	chr10:18661677-18661678
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs11013738	1.00[MEX][hapmap];0.83[TSI][hapmap]
rs11013845	0.85[LWK][hapmap];0.87[YRI][hapmap]
rs11014797	1.00[GIH][hapmap]
rs11014805	1.00[GIH][hapmap]
rs11814504	1.00[MEX][hapmap]
rs12356533	1.00[GIH][hapmap]
rs17684025	1.00[CEU][hapmap];1.00[YRI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046458	chr10:18629603-18683860	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18652400-18667400	Weak transcription	Left Ventricle	heart
2	chr10:18658000-18664800	Weak transcription	Fetal Heart	heart
3	chr10:18659400-18676000	Weak transcription	Right Ventricle	heart
4	chr10:18661400-18662000	Enhancers	Aorta	Aorta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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