Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1426597	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1426601	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17620983	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17621769	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17621906	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17692996	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs17693837	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17694417	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17694566	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs551097	1.00[AFR][1000 genomes]
rs56288259	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs587704	1.00[AFR][1000 genomes]
rs62511794	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62511797	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62511798	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62511799	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62511816	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62511818	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs649871	1.00[AFR][1000 genomes]
rs72709940	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031633	chr8:69766575-70322790	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv890987	chr8:69959105-70004698	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Strong transcription	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
3	nsv1025578	chr8:69963284-69985807	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:69973000-69974800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr8:69974000-69980600	Weak transcription	HSMM	muscle

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