Variant report

Variant	rs17699616
Chromosome Location	chr1:212097837-212097838
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10494948	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12402547	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12402869	0.85[AMR][1000 genomes]
rs17699706	0.88[AMR][1000 genomes]
rs4474321	0.84[EUR][1000 genomes]
rs61828512	0.84[EUR][1000 genomes]
rs61828513	0.84[EUR][1000 genomes]
rs61828514	0.84[EUR][1000 genomes]
rs6664087	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7524573	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes]

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:212084800-212113000	Weak transcription	Brain Anterior Caudate	brain
2	chr1:212085400-212101800	Weak transcription	Colonic Mucosa	Colon
3	chr1:212088000-212099200	Enhancers	Fetal Intestine Large	intestine
4	chr1:212088600-212099200	Enhancers	Fetal Intestine Small	intestine
5	chr1:212091000-212102200	Weak transcription	Esophagus	oesophagus
6	chr1:212093000-212098400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr1:212093800-212098200	Weak transcription	Rectal Mucosa Donor 31	rectum
8	chr1:212093800-212101800	Weak transcription	Gastric	stomach
9	chr1:212094200-212103200	Weak transcription	Small Intestine	intestine
10	chr1:212094400-212098000	Weak transcription	Fetal Muscle Leg	muscle
11	chr1:212094400-212098200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr1:212094400-212101400	Weak transcription	Stomach Mucosa	stomach
13	chr1:212094400-212102200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr1:212094600-212098400	Weak transcription	Hela-S3	cervix
15	chr1:212095400-212101800	Weak transcription	Right Atrium	heart
16	chr1:212095600-212098400	Weak transcription	A549	lung
17	chr1:212096200-212098400	Weak transcription	HepG2	liver
18	chr1:212096200-212098800	Enhancers	Breast Myoepithelial Primary Cells	Breast
19	chr1:212096600-212101800	Weak transcription	Pancreatic Islets	Pancreatic Islet
20	chr1:212096800-212098800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr1:212097200-212098000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr1:212097200-212098600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr1:212097400-212098400	Weak transcription	HMEC	breast
24	chr1:212097400-212098400	Weak transcription	NHEK	skin
25	chr1:212097800-212098200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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