Variant report

Variant rs17702205
Chromosome Location chr15:50904632-50904633
allele A/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:50846000-50950800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr15:50847000-50920600 Weak transcription Aorta Aorta
3 chr15:50851800-50936400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
4 chr15:50854600-50957400 Strong transcription Primary T helper cells fromperipheralblood blood
5 chr15:50855600-50907200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr15:50855600-50919600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr15:50857400-50922800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr15:50859600-50916600 Strong transcription Primary T cells fromperipheralblood blood
9 chr15:50864000-50907400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr15:50867400-50908200 Weak transcription Stomach Mucosa stomach
11 chr15:50869800-50905400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr15:50869800-50922800 Weak transcription Gastric stomach
13 chr15:50869800-50967600 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr15:50871600-50957600 Strong transcription Primary monocytes fromperipheralblood blood
15 chr15:50878800-50922200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr15:50880400-50935800 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr15:50884000-50920600 Weak transcription Spleen Spleen
18 chr15:50884000-50923000 Weak transcription Pancreas Pancrea
19 chr15:50884800-50920600 Weak transcription Brain Cingulate Gyrus brain
20 chr15:50885400-50913800 Weak transcription Small Intestine intestine
21 chr15:50885400-50919000 Weak transcription Brain Anterior Caudate brain
22 chr15:50885400-50921400 Weak transcription Esophagus oesophagus
23 chr15:50886400-50916000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr15:50887200-50918800 Weak transcription Brain Germinal Matrix brain
25 chr15:50890400-50910000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr15:50890800-50929400 Weak transcription Fetal Brain Male brain
27 chr15:50891000-50920600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr15:50891000-50921400 Weak transcription Psoas Muscle Psoas
29 chr15:50891000-50933200 Weak transcription H9 Cell Line embryonic stem cell
30 chr15:50894200-50907600 Strong transcription Primary T helper cells PMA-I stimulated --
31 chr15:50894400-50906600 Strong transcription Rectal Mucosa Donor 31 rectum
32 chr15:50894400-50909000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr15:50894400-50914000 Strong transcription Placenta Placenta
34 chr15:50894400-50955600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr15:50894600-50906600 Strong transcription iPS-18 Cell Line embryonic stem cell
36 chr15:50894600-50906600 Strong transcription Breast Myoepithelial Primary Cells Breast
37 chr15:50894600-50906600 Strong transcription Dnd41 blood
38 chr15:50894600-50907600 Strong transcription Primary B cells from peripheral blood blood
39 chr15:50894600-50908000 Strong transcription Duodenum Mucosa Duodenum
40 chr15:50894600-50910600 Strong transcription Rectal Mucosa Donor 29 rectum
41 chr15:50894600-50915200 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr15:50894800-50905000 Strong transcription Adipose Nuclei Adipose
43 chr15:50894800-50905600 Strong transcription Skeletal Muscle Female skeletal muscle
44 chr15:50894800-50916000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr15:50895000-50954400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr15:50895200-50906600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr15:50895200-50959000 Strong transcription Liver Liver
48 chr15:50895400-50934400 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr15:50895400-50944800 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr15:50895600-50916000 Weak transcription Fetal Heart heart

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