Variant report

Variant	rs17713208
Chromosome Location	chr7:127079816-127079817
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10253460	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10487483	1.00[YRI][hapmap]
rs11563459	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs11982344	0.82[ASN][1000 genomes]
rs12535604	1.00[YRI][hapmap]
rs1361946	0.83[CHD][hapmap]
rs17862359	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17864212	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs17865261	0.82[ASN][1000 genomes]
rs17866107	0.80[YRI][hapmap]
rs2285337	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2285348	1.00[CHB][hapmap]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs17713208	KCP	cis	cerebellum	SCAN
rs17713208	TPI1P2	cis	parietal	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:127079800-127086200	Weak transcription	Pancreas	Pancrea

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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