Variant report

Variant	rs17865261
Chromosome Location	chr7:127056775-127056776
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10253460	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11539276	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11563459	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11982344	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17713208	0.82[ASN][1000 genomes]
rs17862359	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs17863277	0.81[ASN][1000 genomes]
rs17864192	0.81[ASN][1000 genomes]
rs17864212	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2285337	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs73233010	0.82[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:127046600-127058400	Weak transcription	Pancreas	Pancrea
2	chr7:127051400-127058600	Enhancers	Primary B cells from peripheral blood	blood
3	chr7:127052800-127058000	Enhancers	Primary T helper cells fromperipheralblood	blood
4	chr7:127054600-127056800	Enhancers	Primary T cells from cord blood	blood
5	chr7:127054600-127058400	Enhancers	Primary B cells from cord blood	blood
6	chr7:127054800-127058000	Enhancers	Primary T helper cells PMA-I stimulated	--
7	chr7:127055400-127058200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
8	chr7:127055600-127056800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
9	chr7:127055600-127056800	Weak transcription	GM12878-XiMat	blood
10	chr7:127056000-127057000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
11	chr7:127056000-127059200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
12	chr7:127056200-127057000	Weak transcription	Primary T cells fromperipheralblood	blood
13	chr7:127056400-127056800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
14	chr7:127056600-127057000	Weak transcription	Primary T killer memory cells from peripheral blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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