Variant report
Variant | rs17864212 |
---|---|
Chromosome Location | chr7:127039613-127039614 |
allele | G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:4)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:4 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr7:127039588..127041678-chr7:127043379..127046046,3 | K562 | blood: | |
2 | chr7:127030420..127033990-chr7:127034934..127040808,8 | MCF-7 | breast: | |
3 | chr7:127031453..127035052-chr7:127037163..127040431,4 | MCF-7 | breast: | |
4 | chr7:127038677..127040829-chr7:127049998..127052890,2 | MCF-7 | breast: |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000048405 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs10253460 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs11539276 | 0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs11563459 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11982344 | 0.93[AFR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17713208 | 0.82[ASN][1000 genomes] |
rs17862359 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes] |
rs17863277 | 0.81[ASN][1000 genomes] |
rs17864192 | 0.81[ASN][1000 genomes] |
rs17865261 | 0.94[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2285337 | 0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs73233010 | 0.82[ASN][1000 genomes] |
No data |