Variant report

Variant rs17730888
Chromosome Location chr15:41637547-41637548
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:41625400-41670200 Weak transcription Gastric stomach
2 chr15:41625600-41659200 Weak transcription Lung lung
3 chr15:41625800-41665800 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr15:41625800-41694200 Weak transcription Small Intestine intestine
5 chr15:41626000-41642000 Weak transcription Ovary ovary
6 chr15:41626000-41665200 Weak transcription Placenta Amnion Placenta Amnion
7 chr15:41626200-41640600 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr15:41626200-41643400 Weak transcription Spleen Spleen
9 chr15:41626200-41658200 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr15:41626200-41678200 Weak transcription Liver Liver
11 chr15:41626200-41680200 Weak transcription Fetal Brain Male brain
12 chr15:41626400-41677800 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr15:41626400-41678400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr15:41626600-41643400 Weak transcription Primary B cells from cord blood blood
15 chr15:41626800-41641200 Weak transcription Placenta Placenta
16 chr15:41626800-41642800 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr15:41626800-41643200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr15:41626800-41643400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr15:41626800-41686400 Weak transcription Rectal Smooth Muscle rectum
20 chr15:41627000-41638000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr15:41627000-41672800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr15:41627200-41676800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr15:41627400-41668000 Weak transcription ES-WA7 Cell Line embryonic stem cell
24 chr15:41627400-41673000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr15:41628200-41673000 Strong transcription HUES64 Cell Line embryonic stem cell
26 chr15:41628600-41672800 Strong transcription HUES6 Cell Line embryonic stem cell
27 chr15:41628600-41673800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr15:41628800-41654400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr15:41629000-41672000 Weak transcription Primary T cells from cord blood blood
30 chr15:41629000-41673000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr15:41629400-41672400 Strong transcription Fetal Stomach stomach
32 chr15:41629400-41672800 Strong transcription HUES48 Cell Line embryonic stem cell
33 chr15:41629400-41673600 Strong transcription Primary hematopoietic stem cells short term culture blood
34 chr15:41629600-41674000 Strong transcription Fetal Thymus thymus
35 chr15:41629800-41658800 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr15:41630000-41662000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr15:41630400-41649600 Strong transcription Fetal Muscle Trunk muscle
38 chr15:41630400-41674000 Strong transcription iPS-18 Cell Line embryonic stem cell
39 chr15:41630400-41674200 Strong transcription H1 Cell Line embryonic stem cell
40 chr15:41630800-41642800 Weak transcription Fetal Heart heart
41 chr15:41630800-41673800 Strong transcription Dnd41 blood
42 chr15:41631200-41643400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr15:41631200-41659200 Weak transcription Primary B cells from peripheral blood blood
44 chr15:41631800-41649600 Strong transcription Cortex derived primary cultured neurospheres brain
45 chr15:41631800-41679200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr15:41632000-41654600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr15:41632000-41673000 Strong transcription iPS-20b Cell Line embryonic stem cell
48 chr15:41632000-41673600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr15:41632200-41638400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr15:41632200-41638600 Strong transcription HepG2 liver

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