The 2.0 version of rSNPBase

Variant report

Variant rs28673484
Chromosome Location chr15:41722242-41722243
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:41710400-41724600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr15:41710400-41745200 Weak transcription Esophagus oesophagus
3 chr15:41710400-41750000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr15:41710600-41723800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr15:41710600-41723800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr15:41710600-41729800 Weak transcription Brain Substantia Nigra brain
7 chr15:41710600-41731600 Weak transcription Placenta Amnion Placenta Amnion
8 chr15:41710600-41731600 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr15:41710600-41731800 Weak transcription Brain Inferior Temporal Lobe brain
10 chr15:41710600-41733600 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr15:41710600-41745200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr15:41710800-41724200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr15:41710800-41724800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr15:41710800-41724800 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr15:41710800-41726600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr15:41710800-41727800 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr15:41710800-41729800 Weak transcription Brain Cingulate Gyrus brain
18 chr15:41710800-41729800 Weak transcription Psoas Muscle Psoas
19 chr15:41710800-41730200 Weak transcription Fetal Intestine Large intestine
20 chr15:41710800-41730600 Weak transcription Muscle Satellite Cultured Cells --
21 chr15:41710800-41731600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr15:41710800-41731800 Weak transcription Left Ventricle heart
23 chr15:41710800-41733400 Weak transcription Brain Hippocampus Middle brain
24 chr15:41710800-41733400 Weak transcription HSMMtube muscle
25 chr15:41711000-41729800 Weak transcription Placenta Placenta
26 chr15:41711000-41730200 Weak transcription Adipose Nuclei Adipose
27 chr15:41711000-41730600 Weak transcription Osteobl bone
28 chr15:41711200-41722600 Weak transcription Fetal Muscle Leg muscle
29 chr15:41711200-41723800 Weak transcription Primary monocytes fromperipheralblood blood
30 chr15:41711200-41724000 Weak transcription Thymus Thymus
31 chr15:41711200-41724400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr15:41711200-41727800 Weak transcription Fetal Thymus thymus
33 chr15:41711400-41723600 Weak transcription Fetal Intestine Small intestine
34 chr15:41711400-41730600 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr15:41711400-41733400 Weak transcription Brain Angular Gyrus brain
36 chr15:41711400-41733400 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr15:41711600-41725000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr15:41711600-41731000 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr15:41711600-41746800 Weak transcription A549 lung
40 chr15:41711600-41759000 Weak transcription Fetal Heart heart
41 chr15:41711800-41735400 Weak transcription Fetal Kidney kidney
42 chr15:41712800-41733600 Weak transcription Fetal Lung lung
43 chr15:41713200-41723800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr15:41713200-41724600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr15:41713200-41730400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr15:41713200-41745200 Weak transcription Spleen Spleen
47 chr15:41713400-41731800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr15:41714800-41730600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr15:41715800-41730600 Weak transcription Ovary ovary
50 chr15:41716600-41724000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015