The 2.0 version of rSNPBase

Variant report

Variant rs17771942
Chromosome Location chr2:46989262-46989263
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:46974600-46990000 Weak transcription Colonic Mucosa Colon
2 chr2:46976200-46990400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr2:46979600-46989600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr2:46981200-46989600 Weak transcription Small Intestine intestine
5 chr2:46981200-46991000 Weak transcription H9 Cell Line embryonic stem cell
6 chr2:46981400-47006800 Weak transcription Psoas Muscle Psoas
7 chr2:46981800-46993200 Weak transcription Fetal Heart heart
8 chr2:46983200-46990400 Strong transcription Osteobl bone
9 chr2:46983600-46989600 Weak transcription Colon Smooth Muscle Colon
10 chr2:46984400-46998600 Weak transcription Fetal Brain Male brain
11 chr2:46985000-46990200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr2:46985200-46991400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr2:46985600-46998600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr2:46985600-47008200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr2:46986800-46989600 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr2:46987000-46993000 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr2:46987200-46990200 Weak transcription Placenta Placenta
18 chr2:46987200-46995000 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr2:46987200-46996200 Weak transcription Stomach Smooth Muscle stomach
20 chr2:46987200-46997800 Weak transcription Liver Liver
21 chr2:46987400-46989400 Weak transcription Brain Hippocampus Middle brain
22 chr2:46987400-46989400 Weak transcription Gastric stomach
23 chr2:46987400-46989400 Weak transcription Lung lung
24 chr2:46987400-46989800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr2:46987400-46989800 Weak transcription Aorta Aorta
26 chr2:46987400-46990400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
27 chr2:46987400-46990400 Weak transcription Esophagus oesophagus
28 chr2:46987400-46990400 Weak transcription Rectal Smooth Muscle rectum
29 chr2:46987400-46991000 Weak transcription Ovary ovary
30 chr2:46987400-46991000 Weak transcription A549 lung
31 chr2:46987400-46991200 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr2:46987400-46991400 Weak transcription NHLF lung
33 chr2:46987400-46991600 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr2:46987400-46992800 Weak transcription Primary hematopoietic stem cells blood
35 chr2:46987400-46992800 Weak transcription HSMMtube muscle
36 chr2:46987400-46993200 Weak transcription Duodenum Mucosa Duodenum
37 chr2:46987400-46993400 Weak transcription Pancreas Pancrea
38 chr2:46987400-46997000 Weak transcription Fetal Lung lung
39 chr2:46987400-46997400 Weak transcription Fetal Stomach stomach
40 chr2:46987400-46997600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr2:46987400-46997600 Weak transcription Fetal Intestine Small intestine
42 chr2:46987400-47005600 Weak transcription Fetal Muscle Leg muscle
43 chr2:46987400-47005600 Weak transcription Left Ventricle heart
44 chr2:46987600-46989400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr2:46987600-46989400 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr2:46987600-46989400 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr2:46987600-46989600 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr2:46987600-46989800 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr2:46987600-46990200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr2:46987600-46990200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015