Variant report

Variant rs1792270
Chromosome Location chr11:71144065-71144066
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:71135000-71150600 Weak transcription NH-A brain
2 chr11:71135400-71145000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr11:71137000-71144800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr11:71137200-71145000 Weak transcription Brain Germinal Matrix brain
5 chr11:71137200-71149600 Weak transcription Primary B cells from peripheral blood blood
6 chr11:71137600-71146000 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr11:71138000-71144800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr11:71138000-71145200 Weak transcription HMEC breast
9 chr11:71139200-71145000 Weak transcription GM12878-XiMat blood
10 chr11:71139200-71145800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr11:71139400-71145000 Enhancers Fetal Adrenal Gland Adrenal Gland
12 chr11:71139600-71145200 Enhancers Ovary ovary
13 chr11:71140400-71145000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr11:71140600-71144600 Weak transcription Right Ventricle heart
15 chr11:71140600-71158200 Weak transcription Fetal Brain Male brain
16 chr11:71140800-71144800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr11:71140800-71145800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr11:71140800-71154000 Weak transcription Fetal Lung lung
19 chr11:71140800-71154000 Weak transcription HSMM muscle
20 chr11:71141000-71145800 Weak transcription HSMMtube muscle
21 chr11:71141200-71148200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr11:71141600-71144600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr11:71141600-71144800 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr11:71141600-71145000 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr11:71141600-71145200 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr11:71141800-71144400 Weak transcription Primary T cells from cord blood blood
27 chr11:71141800-71144800 Weak transcription Fetal Stomach stomach
28 chr11:71141800-71145800 Enhancers Liver Liver
29 chr11:71142000-71144800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr11:71142200-71144200 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr11:71142400-71144800 Enhancers Brain Inferior Temporal Lobe brain
32 chr11:71142400-71145400 Enhancers Right Atrium heart
33 chr11:71142400-71145600 Enhancers Brain Hippocampus Middle brain
34 chr11:71142400-71145800 Weak transcription NHLF lung
35 chr11:71142400-71146800 Weak transcription Muscle Satellite Cultured Cells --
36 chr11:71142600-71144800 Enhancers Fetal Intestine Small intestine
37 chr11:71142600-71146000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr11:71142600-71146000 Weak transcription Thymus Thymus
39 chr11:71142800-71144600 Weak transcription HUES6 Cell Line embryonic stem cell
40 chr11:71142800-71144800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr11:71142800-71147800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr11:71143000-71144800 Enhancers Rectal Mucosa Donor 31 rectum
43 chr11:71143000-71145200 Enhancers Adipose Nuclei Adipose
44 chr11:71143000-71145200 Enhancers Fetal Intestine Large intestine
45 chr11:71143000-71145600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr11:71143000-71145800 Enhancers Brain Anterior Caudate brain
47 chr11:71143000-71148200 Weak transcription NHDF-Ad bronchial
48 chr11:71143000-71148400 Weak transcription Primary hematopoietic stem cells blood
49 chr11:71143000-71150600 Weak transcription Osteobl bone
50 chr11:71143200-71144800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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