Variant report

Variant rs1808500
Chromosome Location chr15:34873306-34873307
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:34848400-34874600 Weak transcription Esophagus oesophagus
2 chr15:34854600-34873600 Weak transcription GM12878-XiMat blood
3 chr15:34862400-34874000 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr15:34862400-34874600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr15:34862600-34873800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr15:34862600-34874000 Weak transcription Spleen Spleen
7 chr15:34867200-34874000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr15:34867400-34874400 Weak transcription H9 Cell Line embryonic stem cell
9 chr15:34869200-34874000 Weak transcription Colonic Mucosa Colon
10 chr15:34869200-34874200 Weak transcription Aorta Aorta
11 chr15:34870400-34874200 Weak transcription NHLF lung
12 chr15:34870600-34873800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr15:34870600-34873800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr15:34870600-34873800 Weak transcription Hela-S3 cervix
15 chr15:34870600-34874000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr15:34870600-34874600 Weak transcription NHDF-Ad bronchial
17 chr15:34870800-34873400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr15:34870800-34873800 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr15:34870800-34873800 Weak transcription K562 blood
20 chr15:34870800-34874000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr15:34870800-34874200 Weak transcription A549 lung
22 chr15:34871000-34873600 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr15:34871000-34874400 Weak transcription Osteobl bone
24 chr15:34871400-34873800 Enhancers Fetal Muscle Leg muscle
25 chr15:34871800-34874000 Enhancers Skeletal Muscle Female skeletal muscle
26 chr15:34871800-34874600 Enhancers Fetal Heart heart
27 chr15:34872000-34874600 Enhancers Fetal Brain Male brain
28 chr15:34872200-34874000 Bivalent Enhancer Fetal Muscle Trunk muscle
29 chr15:34872400-34874000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
30 chr15:34872400-34874200 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr15:34872400-34874200 Enhancers Cortex derived primary cultured neurospheres brain
32 chr15:34872400-34874400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr15:34872400-34874400 Enhancers Brain Cingulate Gyrus brain
34 chr15:34872600-34873400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr15:34872600-34873800 Enhancers Primary T regulatory cells fromperipheralblood blood
36 chr15:34872600-34874000 Enhancers Gastric stomach
37 chr15:34872600-34874000 Enhancers HMEC breast
38 chr15:34872600-34874400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr15:34872600-34874400 Enhancers Muscle Satellite Cultured Cells --
40 chr15:34872600-34874600 Enhancers Right Ventricle heart
41 chr15:34872800-34873400 Enhancers Right Atrium heart
42 chr15:34872800-34873600 Flanking Active TSS Pancreas Pancrea
43 chr15:34872800-34874000 Enhancers Fetal Brain Female brain
44 chr15:34872800-34874600 Enhancers Liver Liver
45 chr15:34872800-34874600 Enhancers Lung lung
46 chr15:34873000-34873400 Enhancers HUES6 Cell Line embryonic stem cell
47 chr15:34873000-34873400 Genic enhancers Primary hematopoietic stem cells short term culture blood
48 chr15:34873000-34873400 Enhancers Primary T killer memory cells from peripheral blood blood
49 chr15:34873000-34873400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr15:34873000-34873400 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain

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