Variant report

Variant	rs1821340
Chromosome Location	chr8:130605291-130605292
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10458304	0.84[CHB][hapmap];0.91[EUR][1000 genomes]
rs2043405	0.85[CHB][hapmap];0.91[EUR][1000 genomes]
rs2163949	0.85[CHB][hapmap];0.82[EUR][1000 genomes]
rs2163951	0.86[CEU][hapmap];1.00[CHB][hapmap];0.91[YRI][hapmap];0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4259387	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4352812	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6470741	0.82[EUR][1000 genomes]
rs6982402	0.85[CHB][hapmap];0.82[EUR][1000 genomes]
rs6983040	0.82[EUR][1000 genomes]
rs6986451	0.85[CHB][hapmap];0.82[EUR][1000 genomes]
rs7000917	0.85[CHB][hapmap]
rs7004211	0.85[CHB][hapmap];0.82[EUR][1000 genomes]
rs7005206	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap]
rs7006929	0.85[CHB][hapmap]
rs7013192	0.85[CHB][hapmap]
rs7013883	0.85[CHB][hapmap]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130592600-130607000	Enhancers	Primary hematopoietic stem cells	blood
2	chr8:130595200-130605800	Enhancers	Primary hematopoietic stem cells short term culture	blood
3	chr8:130599400-130605400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr8:130599400-130605600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr8:130602200-130606000	Enhancers	K562	blood
6	chr8:130602200-130606400	Enhancers	Fetal Muscle Leg	muscle
7	chr8:130602200-130606800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr8:130602400-130606400	Enhancers	Fetal Thymus	thymus
9	chr8:130603400-130606000	Enhancers	Primary monocytes fromperipheralblood	blood
10	chr8:130603600-130605600	Enhancers	Primary neutrophils fromperipheralblood	blood
11	chr8:130603600-130606000	Enhancers	Monocytes-CD14+_RO01746	blood
12	chr8:130603800-130605800	Enhancers	Thymus	Thymus
13	chr8:130604000-130605600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
14	chr8:130604800-130605400	Enhancers	HSMM	muscle
15	chr8:130605000-130606400	Enhancers	Fetal Muscle Trunk	muscle
16	chr8:130605000-130606600	Flanking Active TSS	Dnd41	blood
17	chr8:130605200-130606000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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