Variant report

Variant	rs2043405
Chromosome Location	chr8:130596548-130596549
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10458304	0.88[CEU][hapmap];1.00[CHB][hapmap];0.91[YRI][hapmap];0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1821340	0.85[CHB][hapmap];0.91[EUR][1000 genomes]
rs2163949	0.87[CEU][hapmap];1.00[CHB][hapmap];0.95[YRI][hapmap];0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2163951	0.93[CEU][hapmap];0.94[TSI][hapmap];0.81[YRI][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4259387	0.90[EUR][1000 genomes]
rs4352812	0.90[EUR][1000 genomes]
rs6470741	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6982402	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6983040	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6986451	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7000917	0.86[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7004211	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7005206	1.00[ASW][hapmap];0.81[CEU][hapmap];0.85[CHB][hapmap];0.89[TSI][hapmap]
rs7006929	0.87[CEU][hapmap];1.00[CHB][hapmap];0.95[YRI][hapmap];0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7013192	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7013883	1.00[ASW][hapmap];0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[LWK][hapmap];0.94[MKK][hapmap];0.94[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130592400-130601200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr8:130592600-130603600	Enhancers	Dnd41	blood
3	chr8:130592600-130607000	Enhancers	Primary hematopoietic stem cells	blood
4	chr8:130593800-130596800	Flanking Active TSS	K562	blood
5	chr8:130594800-130599000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr8:130595200-130602200	Weak transcription	Thymus	Thymus
7	chr8:130595200-130605800	Enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr8:130595600-130596800	Weak transcription	Fetal Thymus	thymus
9	chr8:130595600-130599000	Weak transcription	H9 Cell Line	embryonic stem cell
10	chr8:130595600-130603400	Weak transcription	Primary monocytes fromperipheralblood	blood
11	chr8:130595800-130597200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr8:130596000-130603600	Weak transcription	Monocytes-CD14+_RO01746	blood
13	chr8:130596200-130598800	Weak transcription	Fetal Muscle Leg	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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