Variant report

Variant	rs7004211
Chromosome Location	chr8:130594056-130594057
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:7)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:130592934..130595318-chr8:130597344..130598932,2	K562	blood:
2	chr8:130315366..130317097-chr8:130593776..130595737,2	K562	blood:
3	chr8:128746422..128748430-chr8:130592546..130594989,2	K562	blood:
4	chr8:130583915..130590962-chr8:130591367..130597436,13	K562	blood:
5	chr8:130593091..130595640-chr8:130733142..130736387,3	K562	blood:
6	chr8:130593017..130595980-chr8:130602538..130604620,4	K562	blood:
7	chr8:130561706..130563551-chr8:130592862..130594645,2	K562	blood:

No data

No data

No data

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10458304	1.00[CHB][hapmap];0.91[YRI][hapmap];0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1821340	0.85[CHB][hapmap];0.82[EUR][1000 genomes]
rs2043405	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2163949	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2163951	0.81[CEU][hapmap];0.88[EUR][1000 genomes]
rs4259387	0.80[EUR][1000 genomes]
rs4352812	0.80[EUR][1000 genomes]
rs6470741	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6982402	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6983040	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6986451	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7000917	1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7005206	0.85[CHB][hapmap]
rs7006929	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[YRI][hapmap];0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7013192	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7013883	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130592400-130601200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr8:130592600-130595400	Enhancers	Primary neutrophils fromperipheralblood	blood
3	chr8:130592600-130603600	Enhancers	Dnd41	blood
4	chr8:130592600-130607000	Enhancers	Primary hematopoietic stem cells	blood
5	chr8:130593800-130594200	Enhancers	H9 Cell Line	embryonic stem cell
6	chr8:130593800-130594200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
7	chr8:130593800-130594400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr8:130593800-130594800	Enhancers	Primary B cells from cord blood	blood
9	chr8:130593800-130595600	Enhancers	Primary monocytes fromperipheralblood	blood
10	chr8:130593800-130595600	Enhancers	Fetal Thymus	thymus
11	chr8:130593800-130596800	Flanking Active TSS	K562	blood
12	chr8:130594000-130595000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr8:130594000-130595000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
14	chr8:130594000-130595200	Enhancers	Thymus	Thymus
15	chr8:130594000-130596200	Enhancers	Fetal Muscle Leg	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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