Variant report

Variant	rs2163951
Chromosome Location	chr8:130603357-130603358
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10458304	0.83[CEU][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1821340	0.86[CEU][hapmap];1.00[CHB][hapmap];0.91[YRI][hapmap];0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2043405	0.93[CEU][hapmap];0.94[TSI][hapmap];0.81[YRI][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2163949	0.81[CEU][hapmap];0.88[EUR][1000 genomes]
rs4259387	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4352812	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6470741	0.88[EUR][1000 genomes]
rs6982402	0.81[CEU][hapmap];0.88[EUR][1000 genomes]
rs6983040	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6986451	0.81[CEU][hapmap];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7000917	0.80[CEU][hapmap];0.85[EUR][1000 genomes]
rs7004211	0.81[CEU][hapmap];0.88[EUR][1000 genomes]
rs7005206	0.86[CEU][hapmap];1.00[CHB][hapmap];0.85[GIH][hapmap];0.94[TSI][hapmap];0.90[YRI][hapmap]
rs7006929	0.81[CEU][hapmap];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7013192	0.81[CEU][hapmap];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7013883	0.94[TSI][hapmap];0.81[YRI][hapmap];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130592600-130603600	Enhancers	Dnd41	blood
2	chr8:130592600-130607000	Enhancers	Primary hematopoietic stem cells	blood
3	chr8:130595200-130605800	Enhancers	Primary hematopoietic stem cells short term culture	blood
4	chr8:130595600-130603400	Weak transcription	Primary monocytes fromperipheralblood	blood
5	chr8:130596000-130603600	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr8:130599400-130605200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr8:130599400-130605400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr8:130599400-130605600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
9	chr8:130602200-130606000	Enhancers	K562	blood
10	chr8:130602200-130606400	Enhancers	Fetal Muscle Leg	muscle
11	chr8:130602200-130606800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr8:130602400-130603800	Weak transcription	Thymus	Thymus
13	chr8:130602400-130606400	Enhancers	Fetal Thymus	thymus
14	chr8:130602600-130604200	Enhancers	Skeletal Muscle Male	skeletal muscle
15	chr8:130602800-130604000	Weak transcription	Placenta	Placenta
16	chr8:130603000-130603800	Weak transcription	Skeletal Muscle Female	skeletal muscle
17	chr8:130603000-130604000	Weak transcription	Fetal Muscle Trunk	muscle
18	chr8:130603200-130603600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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