The 2.0 version of rSNPBase

Variant report

Variant rs1824363
Chromosome Location chr3:48490608-48490609
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:48489000-48492000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr3:48489000-48492800 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr3:48489000-48492800 Weak transcription Fetal Muscle Trunk muscle
4 chr3:48489000-48492800 Weak transcription Left Ventricle heart
5 chr3:48489000-48493200 Weak transcription Ovary ovary
6 chr3:48489000-48494400 Weak transcription Aorta Aorta
7 chr3:48489200-48491400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr3:48489200-48492000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr3:48489200-48492400 Weak transcription H1 Cell Line embryonic stem cell
10 chr3:48489200-48492400 Weak transcription Lung lung
11 chr3:48489200-48492600 Weak transcription Primary T cells from cord blood blood
12 chr3:48489200-48492600 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr3:48489200-48492600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr3:48489200-48492800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr3:48489200-48493000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr3:48489200-48494400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr3:48489200-48494400 Weak transcription Esophagus oesophagus
18 chr3:48489200-48494600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr3:48489200-48494800 Weak transcription Placenta Amnion Placenta Amnion
20 chr3:48489200-48498800 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr3:48489200-48506200 Weak transcription Stomach Mucosa stomach
22 chr3:48489200-48507400 Weak transcription ES-WA7 Cell Line embryonic stem cell
23 chr3:48489400-48491400 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr3:48489400-48491400 Weak transcription Monocytes-CD14+_RO01746 blood
25 chr3:48489400-48491800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr3:48489400-48492000 Weak transcription Liver Liver
27 chr3:48489400-48492000 Weak transcription Placenta Placenta
28 chr3:48489400-48492400 Weak transcription Primary monocytes fromperipheralblood blood
29 chr3:48489400-48492400 Weak transcription Fetal Brain Female brain
30 chr3:48489400-48492600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr3:48489400-48492600 Weak transcription H9 Cell Line embryonic stem cell
32 chr3:48489400-48492600 Weak transcription Primary T cells fromperipheralblood blood
33 chr3:48489400-48492600 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr3:48489400-48492600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr3:48489400-48492600 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr3:48489400-48492600 Weak transcription Stomach Smooth Muscle stomach
37 chr3:48489400-48492800 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr3:48489400-48492800 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr3:48489400-48492800 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr3:48489400-48492800 Weak transcription Brain Anterior Caudate brain
41 chr3:48489400-48492800 Weak transcription Brain Cingulate Gyrus brain
42 chr3:48489400-48492800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr3:48489400-48492800 Weak transcription Duodenum Mucosa Duodenum
44 chr3:48489400-48492800 Weak transcription Fetal Intestine Large intestine
45 chr3:48489400-48492800 Weak transcription Fetal Thymus thymus
46 chr3:48489400-48493200 Weak transcription Brain Hippocampus Middle brain
47 chr3:48489400-48493200 Weak transcription Brain Inferior Temporal Lobe brain
48 chr3:48489400-48493200 Weak transcription Right Ventricle heart
49 chr3:48489400-48493200 Weak transcription HSMM muscle
50 chr3:48489400-48493400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015