Variant report

Variant rs9849509
Chromosome Location chr3:48483432-48483433
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:48481600-48483600 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
2 chr3:48481600-48483600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
3 chr3:48482400-48483600 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
4 chr3:48482400-48483600 Enhancers Fetal Heart heart
5 chr3:48482400-48485000 Weak transcription Aorta Aorta
6 chr3:48482600-48483600 Genic enhancers Primary monocytes fromperipheralblood blood
7 chr3:48482600-48483600 Enhancers Liver Liver
8 chr3:48482600-48483600 Enhancers Stomach Mucosa stomach
9 chr3:48482600-48484000 Weak transcription H9 Cell Line embryonic stem cell
10 chr3:48482600-48487200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr3:48482600-48487200 Weak transcription Right Atrium heart
12 chr3:48482600-48487400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr3:48482600-48487600 Weak transcription Ovary ovary
14 chr3:48482800-48483600 Transcr. at gene 5' and 3' H9 Derived Neuron Cultured Cells ES cell derived
15 chr3:48482800-48483600 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
16 chr3:48482800-48483600 Genic enhancers Primary neutrophils fromperipheralblood blood
17 chr3:48482800-48483600 Genic enhancers Brain Cingulate Gyrus brain
18 chr3:48482800-48483600 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
19 chr3:48482800-48483600 Genic enhancers Fetal Lung lung
20 chr3:48482800-48483600 Transcr. at gene 5' and 3' Dnd41 blood
21 chr3:48482800-48483800 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
22 chr3:48482800-48483800 Genic enhancers Placenta Amnion Placenta Amnion
23 chr3:48482800-48483800 Transcr. at gene 5' and 3' GM12878-XiMat blood
24 chr3:48482800-48483800 Transcr. at gene 5' and 3' Hela-S3 cervix
25 chr3:48482800-48484400 Genic enhancers Primary B cells from peripheral blood blood
26 chr3:48482800-48484400 Genic enhancers Primary T regulatory cells fromperipheralblood blood
27 chr3:48483000-48483600 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr3:48483000-48483600 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
29 chr3:48483000-48483600 Transcr. at gene 5' and 3' iPS-18 Cell Line embryonic stem cell
30 chr3:48483000-48483600 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr3:48483000-48483600 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell
32 chr3:48483000-48483600 Transcr. at gene 5' and 3' Primary T cells from cord blood blood
33 chr3:48483000-48483600 Transcr. at gene 5' and 3' Primary T helper naive cells from peripheral blood blood
34 chr3:48483000-48483600 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
35 chr3:48483000-48483600 Transcr. at gene 5' and 3' Primary T helper cells fromperipheralblood blood
36 chr3:48483000-48483600 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr3:48483000-48483600 Genic enhancers Adipose Nuclei Adipose
38 chr3:48483000-48483600 Genic enhancers Brain Inferior Temporal Lobe brain
39 chr3:48483000-48483600 Genic enhancers Colon Smooth Muscle Colon
40 chr3:48483000-48483600 Genic enhancers Fetal Adrenal Gland Adrenal Gland
41 chr3:48483000-48483600 Genic enhancers Fetal Muscle Leg muscle
42 chr3:48483000-48483600 Genic enhancers Placenta Placenta
43 chr3:48483000-48483600 Genic enhancers Fetal Stomach stomach
44 chr3:48483000-48483600 Genic enhancers Rectal Mucosa Donor 31 rectum
45 chr3:48483000-48483600 Transcr. at gene 5' and 3' HMEC breast
46 chr3:48483000-48483600 Transcr. at gene 5' and 3' HSMM muscle
47 chr3:48483000-48483600 Enhancers HSMMtube muscle
48 chr3:48483000-48483800 Transcr. at gene 5' and 3' Primary T killer memory cells from peripheral blood blood
49 chr3:48483000-48483800 Genic enhancers Ganglion Eminence derived primary cultured neurospheres brain
50 chr3:48483000-48483800 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin

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