Variant report

Variant rs2242150
Chromosome Location chr3:48505964-48505965
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:48489200-48506200 Weak transcription Stomach Mucosa stomach
2 chr3:48489200-48507400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr3:48489600-48506400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr3:48489800-48506600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr3:48491400-48506600 Strong transcription Primary hematopoietic stem cells short term culture blood
6 chr3:48491800-48506400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr3:48492600-48506000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr3:48492800-48506000 Strong transcription Fetal Muscle Trunk muscle
9 chr3:48493200-48506400 Weak transcription Fetal Heart heart
10 chr3:48493400-48507200 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr3:48493800-48506600 Strong transcription Fetal Intestine Small intestine
12 chr3:48496800-48507200 Weak transcription Psoas Muscle Psoas
13 chr3:48498600-48506200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr3:48498600-48506400 Strong transcription Fetal Brain Female brain
15 chr3:48500200-48506000 Strong transcription Spleen Spleen
16 chr3:48500800-48506600 Weak transcription Fetal Brain Male brain
17 chr3:48500800-48506800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr3:48501200-48506400 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr3:48501200-48506400 Weak transcription NHDF-Ad bronchial
20 chr3:48501200-48506600 Weak transcription Fetal Kidney kidney
21 chr3:48501800-48506600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr3:48502200-48506800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr3:48502200-48507200 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr3:48502400-48506800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr3:48502400-48507000 Weak transcription Primary hematopoietic stem cells blood
26 chr3:48502600-48506200 Strong transcription Placenta Placenta
27 chr3:48502600-48506400 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr3:48502600-48506400 Weak transcription Brain Substantia Nigra brain
29 chr3:48502600-48506400 Weak transcription Rectal Smooth Muscle rectum
30 chr3:48502600-48506400 Weak transcription Hela-S3 cervix
31 chr3:48502600-48506600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr3:48502600-48506600 Weak transcription HSMM muscle
33 chr3:48502800-48506000 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr3:48502800-48506000 Weak transcription Brain Hippocampus Middle brain
35 chr3:48502800-48506000 Weak transcription Colonic Mucosa Colon
36 chr3:48502800-48506000 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr3:48502800-48506200 Weak transcription Brain Cingulate Gyrus brain
38 chr3:48502800-48506200 Weak transcription Gastric stomach
39 chr3:48502800-48506200 Weak transcription Pancreas Pancrea
40 chr3:48502800-48506200 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr3:48502800-48506200 Weak transcription Right Ventricle heart
42 chr3:48502800-48506200 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr3:48502800-48506400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr3:48502800-48506400 Weak transcription Muscle Satellite Cultured Cells --
45 chr3:48502800-48506600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr3:48502800-48506600 Weak transcription Primary B cells from cord blood blood
47 chr3:48502800-48506600 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr3:48502800-48506800 Weak transcription Primary T killer naive cells fromperipheralblood blood
49 chr3:48503000-48506200 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr3:48503000-48506200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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