Variant report

Variant	rs1834064
Chromosome Location	chr16:59276342-59276343
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs1000100	0.83[EUR][1000 genomes]
rs1000102	0.83[EUR][1000 genomes]
rs1019571	0.84[EUR][1000 genomes]
rs1027913	0.84[EUR][1000 genomes]
rs12447529	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12709025	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12925044	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12929739	0.81[EUR][1000 genomes]
rs1582588	0.84[EUR][1000 genomes]
rs1593112	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1593146	0.82[EUR][1000 genomes]
rs1593148	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1593149	0.85[EUR][1000 genomes]
rs1593151	0.85[EUR][1000 genomes]
rs1610077	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1813437	0.81[EUR][1000 genomes]
rs1834058	0.87[EUR][1000 genomes]
rs1834059	0.84[EUR][1000 genomes]
rs2036805	0.90[AFR][1000 genomes];0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2036806	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2036807	0.80[EUR][1000 genomes]
rs2406766	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2406779	0.84[EUR][1000 genomes]
rs3958621	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4146209	0.84[EUR][1000 genomes]
rs4494528	0.84[EUR][1000 genomes]
rs4785028	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4785029	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6500029	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6500031	0.83[EUR][1000 genomes]
rs7198374	0.85[EUR][1000 genomes]
rs7198887	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7201230	0.84[EUR][1000 genomes]
rs7202693	0.84[EUR][1000 genomes]
rs7204255	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs8043584	0.85[EUR][1000 genomes]
rs907053	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9927205	0.84[EUR][1000 genomes]
rs9927985	0.90[AFR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9940394	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833247	chr16:59132198-59293527	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:59276200-59276600	Enhancers	Fetal Lung	lung
2	chr16:59276200-59276800	Active TSS	Fetal Brain Male	brain

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