Variant report
Variant | rs1843112 |
---|---|
Chromosome Location | chr1:102122574-102122575 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10493958 | 0.84[ASN][1000 genomes] |
rs11164238 | 0.84[ASN][1000 genomes] |
rs11164239 | 0.84[ASN][1000 genomes] |
rs11164241 | 0.84[ASN][1000 genomes] |
rs11164242 | 0.88[ASN][1000 genomes] |
rs11164243 | 0.84[ASN][1000 genomes] |
rs11164244 | 0.84[ASN][1000 genomes] |
rs11164245 | 0.84[ASN][1000 genomes] |
rs11164250 | 0.84[ASN][1000 genomes] |
rs11164251 | 0.84[ASN][1000 genomes] |
rs11164252 | 0.84[ASN][1000 genomes] |
rs11164274 | 0.80[AFR][1000 genomes] |
rs11488027 | 0.84[ASN][1000 genomes] |
rs12068247 | 0.84[ASN][1000 genomes] |
rs12068329 | 0.84[ASN][1000 genomes] |
rs12073459 | 0.84[ASN][1000 genomes] |
rs12073466 | 0.84[ASN][1000 genomes] |
rs12074035 | 0.84[ASN][1000 genomes] |
rs12074162 | 0.88[ASN][1000 genomes] |
rs12078720 | 0.84[ASN][1000 genomes] |
rs12078847 | 0.84[ASN][1000 genomes] |
rs12079908 | 0.84[ASN][1000 genomes] |
rs12080001 | 0.84[ASN][1000 genomes] |
rs12083840 | 0.84[ASN][1000 genomes] |
rs12088445 | 0.84[ASN][1000 genomes] |
rs12088450 | 0.84[ASN][1000 genomes] |
rs12094579 | 0.84[ASN][1000 genomes] |
rs12724739 | 0.84[ASN][1000 genomes] |
rs12743322 | 0.84[ASN][1000 genomes] |
rs1484295 | 0.84[ASN][1000 genomes] |
rs1484296 | 0.84[ASN][1000 genomes] |
rs1552290 | 0.88[ASN][1000 genomes] |
rs17125096 | 0.84[ASN][1000 genomes] |
rs28772944 | 0.84[ASN][1000 genomes] |
rs28786227 | 0.84[ASN][1000 genomes] |
rs28789110 | 0.84[ASN][1000 genomes] |
rs28790366 | 0.84[ASN][1000 genomes] |
rs28822436 | 0.84[ASN][1000 genomes] |
rs28893919 | 0.84[ASN][1000 genomes] |
rs4907951 | 0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs56173817 | 0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs60629450 | 0.80[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs6679807 | 0.80[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs66943779 | 0.84[ASN][1000 genomes] |
rs67789472 | 0.84[ASN][1000 genomes] |
rs7537078 | 0.88[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv870459 | chr1:102112168-102166616 | Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer | Chromatin interactive region | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:102118000-102122600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
2 | chr1:102120200-102123600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |