Variant report

Variant rs1845288
Chromosome Location chr5:1802229-1802230
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:1798400-1802400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
2 chr5:1798800-1802400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr5:1798800-1802800 Active TSS HUES48 Cell Line embryonic stem cell
4 chr5:1799000-1802400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr5:1799000-1802400 Active TSS H9 Cell Line embryonic stem cell
6 chr5:1799000-1802400 Active TSS Psoas Muscle Psoas
7 chr5:1799000-1802600 Active TSS ES-I3 Cell Line embryonic stem cell
8 chr5:1799000-1802600 Active TSS iPS-20b Cell Line embryonic stem cell
9 chr5:1799000-1802600 Active TSS Fetal Intestine Small intestine
10 chr5:1799000-1802600 Active TSS A549 lung
11 chr5:1799200-1802400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
12 chr5:1799200-1802600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr5:1799200-1802600 Active TSS Pancreatic Islets Pancreatic Islet
14 chr5:1799200-1802800 Active TSS GM12878-XiMat blood
15 chr5:1799400-1802400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr5:1799400-1802400 Active TSS HUES6 Cell Line embryonic stem cell
17 chr5:1799400-1802400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
18 chr5:1799400-1802400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
19 chr5:1799400-1802400 Active TSS Fetal Muscle Trunk muscle
20 chr5:1799400-1802400 Active TSS Lung lung
21 chr5:1799400-1802400 Active TSS Right Ventricle heart
22 chr5:1799400-1802600 Active TSS H1 Cell Line embryonic stem cell
23 chr5:1799400-1802600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr5:1800200-1802400 Flanking Active TSS Primary B cells from cord blood blood
25 chr5:1800200-1802400 Flanking Active TSS Primary hematopoietic stem cells blood
26 chr5:1800600-1802800 Active TSS Rectal Mucosa Donor 29 rectum
27 chr5:1800800-1802400 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
28 chr5:1801000-1802400 Active TSS Colonic Mucosa Colon
29 chr5:1801000-1802400 Active TSS Fetal Intestine Large intestine
30 chr5:1801000-1802600 Active TSS NHLF lung
31 chr5:1801200-1802400 Active TSS Fetal Lung lung
32 chr5:1801200-1802400 Active TSS HepG2 liver
33 chr5:1801200-1802400 Active TSS NHEK skin
34 chr5:1801200-1802600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr5:1801200-1802600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
36 chr5:1801200-1802800 Active TSS K562 blood
37 chr5:1801400-1802400 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
38 chr5:1801400-1802600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
39 chr5:1801400-1802600 Active TSS Breast Myoepithelial Primary Cells Breast
40 chr5:1801400-1802600 Active TSS HMEC breast
41 chr5:1801800-1802400 Flanking Active TSS Primary monocytes fromperipheralblood blood
42 chr5:1801800-1802400 Flanking Active TSS Primary T cells fromperipheralblood blood
43 chr5:1801800-1802400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
44 chr5:1801800-1802400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
45 chr5:1801800-1802400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
46 chr5:1801800-1802400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr5:1801800-1802400 Flanking Active TSS Adipose Nuclei Adipose
48 chr5:1801800-1802400 Flanking Active TSS Duodenum Mucosa Duodenum
49 chr5:1801800-1802400 Flanking Active TSS Fetal Brain Female brain
50 chr5:1801800-1802400 Flanking Active TSS Monocytes-CD14+_RO01746 blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links