Variant report

Variant rs972892
Chromosome Location chr5:1800858-1800859
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:1798400-1802400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
2 chr5:1798800-1802200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr5:1798800-1802400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr5:1798800-1802800 Active TSS HUES48 Cell Line embryonic stem cell
5 chr5:1799000-1802200 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
6 chr5:1799000-1802200 Active TSS Left Ventricle heart
7 chr5:1799000-1802400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr5:1799000-1802400 Active TSS H9 Cell Line embryonic stem cell
9 chr5:1799000-1802400 Active TSS Psoas Muscle Psoas
10 chr5:1799000-1802600 Active TSS ES-I3 Cell Line embryonic stem cell
11 chr5:1799000-1802600 Active TSS iPS-20b Cell Line embryonic stem cell
12 chr5:1799000-1802600 Active TSS Fetal Intestine Small intestine
13 chr5:1799000-1802600 Active TSS A549 lung
14 chr5:1799200-1801400 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr5:1799200-1802200 Active TSS iPS-15b Cell Line embryonic stem cell
16 chr5:1799200-1802200 Active TSS iPS-18 Cell Line embryonic stem cell
17 chr5:1799200-1802200 Active TSS Aorta Aorta
18 chr5:1799200-1802200 Active TSS Fetal Kidney kidney
19 chr5:1799200-1802200 Active TSS Sigmoid Colon Sigmoid Colon
20 chr5:1799200-1802200 Active TSS Small Intestine intestine
21 chr5:1799200-1802200 Active TSS NHDF-Ad bronchial
22 chr5:1799200-1802400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
23 chr5:1799200-1802600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr5:1799200-1802600 Active TSS Pancreatic Islets Pancreatic Islet
25 chr5:1799200-1802800 Active TSS GM12878-XiMat blood
26 chr5:1799400-1801400 Active TSS Primary T helper naive cells fromperipheralblood blood
27 chr5:1799400-1801800 Active TSS Fetal Brain Female brain
28 chr5:1799400-1802000 Active TSS Primary T killer naive cells fromperipheralblood blood
29 chr5:1799400-1802000 Active TSS Primary T killer memory cells from peripheral blood blood
30 chr5:1799400-1802000 Active TSS Brain Anterior Caudate brain
31 chr5:1799400-1802000 Active TSS Brain Germinal Matrix brain
32 chr5:1799400-1802000 Active TSS Brain Inferior Temporal Lobe brain
33 chr5:1799400-1802000 Active TSS Colon Smooth Muscle Colon
34 chr5:1799400-1802000 Active TSS Stomach Mucosa stomach
35 chr5:1799400-1802000 Active TSS Thymus Thymus
36 chr5:1799400-1802000 Active TSS Spleen Spleen
37 chr5:1799400-1802000 Active TSS Dnd41 blood
38 chr5:1799400-1802200 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr5:1799400-1802200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr5:1799400-1802200 Active TSS HUES64 Cell Line embryonic stem cell
41 chr5:1799400-1802200 Active TSS Brain Angular Gyrus brain
42 chr5:1799400-1802200 Active TSS Brain Hippocampus Middle brain
43 chr5:1799400-1802200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
44 chr5:1799400-1802200 Active TSS Brain Substantia Nigra brain
45 chr5:1799400-1802200 Active TSS Esophagus oesophagus
46 chr5:1799400-1802200 Active TSS Gastric stomach
47 chr5:1799400-1802200 Active TSS Ovary ovary
48 chr5:1799400-1802400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr5:1799400-1802400 Active TSS HUES6 Cell Line embryonic stem cell
50 chr5:1799400-1802400 Active TSS ES-UCSF4 Cell Line embryonic stem cell

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