Variant report

Variant rs2291944
Chromosome Location chr5:1799321-1799322
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:1791000-1800200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr5:1798400-1802400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
3 chr5:1798600-1799400 Transcr. at gene 5' and 3' Rectal Smooth Muscle rectum
4 chr5:1798800-1799400 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr5:1798800-1799400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr5:1798800-1799400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
7 chr5:1798800-1799400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr5:1798800-1799400 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
9 chr5:1798800-1799400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
10 chr5:1798800-1799400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
11 chr5:1798800-1799400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
12 chr5:1798800-1799400 Flanking Active TSS Brain Hippocampus Middle brain
13 chr5:1798800-1799400 Flanking Active TSS Colon Smooth Muscle Colon
14 chr5:1798800-1799400 Flanking Active TSS Fetal Brain Female brain
15 chr5:1798800-1799600 Flanking Active TSS Colonic Mucosa Colon
16 chr5:1798800-1799600 Flanking Active TSS Stomach Smooth Muscle stomach
17 chr5:1798800-1800600 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
18 chr5:1798800-1800600 Active TSS Primary T helper cells PMA-I stimulated --
19 chr5:1798800-1802200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr5:1798800-1802400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr5:1798800-1802800 Active TSS HUES48 Cell Line embryonic stem cell
22 chr5:1799000-1799400 Flanking Active TSS H1 Cell Line embryonic stem cell
23 chr5:1799000-1799400 Flanking Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr5:1799000-1799400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
25 chr5:1799000-1799400 Flanking Active TSS HUES6 Cell Line embryonic stem cell
26 chr5:1799000-1799400 Flanking Active TSS HUES64 Cell Line embryonic stem cell
27 chr5:1799000-1799400 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
28 chr5:1799000-1799400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr5:1799000-1799400 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr5:1799000-1799400 Flanking Active TSS Primary T cells from cord blood blood
31 chr5:1799000-1799400 Flanking Active TSS Primary hematopoietic stem cells blood
32 chr5:1799000-1799400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
33 chr5:1799000-1799400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
34 chr5:1799000-1799400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
35 chr5:1799000-1799400 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
36 chr5:1799000-1799400 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
37 chr5:1799000-1799400 Flanking Active TSS Adipose Nuclei Adipose
38 chr5:1799000-1799400 Flanking Active TSS Liver Liver
39 chr5:1799000-1799400 Flanking Active TSS Brain Angular Gyrus brain
40 chr5:1799000-1799400 Flanking Active TSS Brain Anterior Caudate brain
41 chr5:1799000-1799400 Flanking Active TSS Brain Cingulate Gyrus brain
42 chr5:1799000-1799400 Flanking Active TSS Brain Germinal Matrix brain
43 chr5:1799000-1799400 Flanking Active TSS Brain Inferior Temporal Lobe brain
44 chr5:1799000-1799400 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
45 chr5:1799000-1799400 Flanking Active TSS Brain Substantia Nigra brain
46 chr5:1799000-1799400 Flanking Active TSS Duodenum Mucosa Duodenum
47 chr5:1799000-1799400 Flanking Active TSS Duodenum Smooth Muscle Duodenum
48 chr5:1799000-1799400 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
49 chr5:1799000-1799400 Flanking Active TSS Fetal Brain Male brain
50 chr5:1799000-1799400 Enhancers Fetal Heart heart

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