Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10177211	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10177258	1.00[EUR][1000 genomes]
rs10210942	0.87[EUR][1000 genomes]
rs10469656	0.83[EUR][1000 genomes]
rs10932388	0.88[EUR][1000 genomes]
rs12104775	0.96[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12465773	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12616462	0.84[EUR][1000 genomes]
rs1829610	0.86[AMR][1000 genomes]
rs1829611	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1851177	0.84[EUR][1000 genomes]
rs1851178	0.90[EUR][1000 genomes]
rs1851195	0.92[ASN][1000 genomes]
rs1851196	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1851198	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1851199	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1972143	0.87[EUR][1000 genomes]
rs7559679	0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7580963	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7602185	0.87[EUR][1000 genomes]
rs9288434	0.87[EUR][1000 genomes]
rs9288435	0.87[EUR][1000 genomes]
rs9288436	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv460069	chr2:212415948-212471642	Weak transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS Flanking Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv584320	chr2:212415948-212471642	Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv584321	chr2:212446818-212511895	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv2754366	chr2:212470494-212541494	Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212456600-212473600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr2:212467200-212480000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr2:212467400-212546800	Weak transcription	Aorta	Aorta
4	chr2:212470400-212489600	Weak transcription	Fetal Heart	heart

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