Variant report

Variant rs1872772
Chromosome Location chr11:63655846-63655847
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:63650800-63656000 Weak transcription Brain Germinal Matrix brain
2 chr11:63650800-63657600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr11:63652000-63659600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr11:63652200-63659400 Weak transcription Fetal Brain Female brain
5 chr11:63653800-63656000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
6 chr11:63653800-63656000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr11:63654200-63656000 Enhancers Brain Hippocampus Middle brain
8 chr11:63654200-63656000 Enhancers Sigmoid Colon Sigmoid Colon
9 chr11:63654200-63656400 Enhancers A549 lung
10 chr11:63654200-63658000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr11:63654200-63658400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
12 chr11:63654400-63656000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr11:63654400-63656000 Enhancers Colon Smooth Muscle Colon
14 chr11:63654400-63656000 Enhancers Fetal Heart heart
15 chr11:63654400-63656200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr11:63654400-63656200 Enhancers Primary hematopoietic stem cells blood
17 chr11:63654400-63656200 Enhancers Spleen Spleen
18 chr11:63654400-63656400 Enhancers Fetal Adrenal Gland Adrenal Gland
19 chr11:63654400-63656600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
20 chr11:63654400-63656800 Enhancers H1 Cell Line embryonic stem cell
21 chr11:63654400-63656800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr11:63654400-63656800 Enhancers Psoas Muscle Psoas
23 chr11:63654400-63657200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr11:63654400-63657200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
25 chr11:63654400-63657200 Enhancers Brain Inferior Temporal Lobe brain
26 chr11:63654400-63657800 Enhancers Brain Substantia Nigra brain
27 chr11:63654400-63658200 Enhancers Lung lung
28 chr11:63654400-63659000 Enhancers Brain Angular Gyrus brain
29 chr11:63654600-63656000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
30 chr11:63654600-63656000 Enhancers Fetal Muscle Leg muscle
31 chr11:63654600-63656000 Enhancers Placenta Placenta
32 chr11:63654600-63656000 Enhancers Fetal Stomach stomach
33 chr11:63654600-63656000 Enhancers Gastric stomach
34 chr11:63654600-63656000 Enhancers Right Atrium heart
35 chr11:63654600-63656000 Enhancers Skeletal Muscle Male skeletal muscle
36 chr11:63654600-63656800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
37 chr11:63654600-63657600 Enhancers Cortex derived primary cultured neurospheres brain
38 chr11:63654800-63656000 Enhancers Brain Anterior Caudate brain
39 chr11:63654800-63656200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr11:63654800-63656200 Enhancers NHLF lung
41 chr11:63654800-63656400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr11:63654800-63656400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
43 chr11:63654800-63656600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr11:63654800-63656800 Enhancers Fetal Lung lung
45 chr11:63654800-63657200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
46 chr11:63654800-63664000 Weak transcription Fetal Brain Male brain
47 chr11:63655000-63656000 Enhancers Placenta Amnion Placenta Amnion
48 chr11:63655000-63656200 Enhancers Hela-S3 cervix
49 chr11:63655000-63656200 Enhancers NH-A brain
50 chr11:63655000-63656400 Enhancers ES-WA7 Cell Line embryonic stem cell

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