Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:110701534..110704025-chr9:110707903..110710423,2	MCF-7	breast:
2	chr9:110697341..110700302-chr9:110702105..110704543,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10521087	1.00[CEU][hapmap];0.94[TSI][hapmap];0.88[EUR][1000 genomes]
rs10816588	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10816589	0.87[EUR][1000 genomes]
rs10816594	0.90[EUR][1000 genomes]
rs10816595	0.83[EUR][1000 genomes]
rs10979113	0.92[EUR][1000 genomes]
rs10979115	0.89[EUR][1000 genomes]
rs10979116	0.90[EUR][1000 genomes]
rs10979117	0.92[EUR][1000 genomes]
rs10979118	0.92[EUR][1000 genomes]
rs10979122	0.91[EUR][1000 genomes]
rs10979123	0.91[EUR][1000 genomes]
rs11790158	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12376013	0.90[EUR][1000 genomes]
rs12376694	0.92[EUR][1000 genomes]
rs12377529	0.91[EUR][1000 genomes]
rs12380282	0.92[EUR][1000 genomes]
rs2150582	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4526413	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4979601	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4979602	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893701	chr9:110650482-110709587	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:110695800-110705200	Weak transcription	Monocytes-CD14+_RO01746	blood
2	chr9:110696200-110707800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr9:110701200-110703800	Enhancers	Placenta Amnion	Placenta Amnion
4	chr9:110701600-110705000	Weak transcription	Primary monocytes fromperipheralblood	blood
5	chr9:110702200-110711000	Weak transcription	Fetal Intestine Large	intestine
6	chr9:110702400-110703800	Enhancers	Fetal Stomach	stomach
7	chr9:110702600-110704200	Weak transcription	Spleen	Spleen
8	chr9:110702800-110703400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr9:110702800-110703800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung

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