Variant report

Variant	rs1926786
Chromosome Location	chr10:4363173-4363174
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10904225	0.82[ASN][1000 genomes]
rs10904227	0.84[ASN][1000 genomes]
rs11252458	0.84[ASN][1000 genomes]
rs11252459	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12765847	0.82[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs12773994	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12777785	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4536111	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4881316	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7093134	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894785	chr10:4306421-4372629	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:4359000-4373400	Weak transcription	Right Atrium	heart
2	chr10:4359400-4364600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr10:4359800-4366200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr10:4362000-4371000	Weak transcription	Fetal Lung	lung
5	chr10:4362800-4363600	Enhancers	Fetal Muscle Leg	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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