Variant report

Variant	rs4881316
Chromosome Location	chr10:4362720-4362721
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10904225	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10904227	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11252451	0.85[AMR][1000 genomes]
rs11252457	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11252458	0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11252459	0.97[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12765847	0.99[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12769562	0.82[AMR][1000 genomes]
rs12773994	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12777785	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1926786	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2182584	0.85[AMR][1000 genomes]
rs4307624	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4536111	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4579834	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4584477	0.90[AMR][1000 genomes]
rs4881314	0.90[AMR][1000 genomes]
rs7093134	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894785	chr10:4306421-4372629	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:4359000-4362800	Weak transcription	Fetal Muscle Leg	muscle
2	chr10:4359000-4373400	Weak transcription	Right Atrium	heart
3	chr10:4359400-4364600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr10:4359800-4366200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr10:4362000-4371000	Weak transcription	Fetal Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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