Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:4345271..4346802-chr10:4347547..4349820,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10904225	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10904226	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10904227	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11252449	0.85[AMR][1000 genomes]
rs11252451	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11252457	0.85[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11252458	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11252459	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12765847	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12769562	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12773994	0.90[AMR][1000 genomes]
rs12777785	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2182584	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4307624	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4536111	0.89[AMR][1000 genomes]
rs4579834	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4881314	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4881316	0.90[AMR][1000 genomes]
rs7093134	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7098895	0.82[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894785	chr10:4306421-4372629	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv522540	chr10:4343047-4348396	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:4334800-4349200	Weak transcription	Right Atrium	heart
2	chr10:4337800-4349200	Weak transcription	Fetal Heart	heart
3	chr10:4342800-4350600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr10:4344000-4348800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr10:4344400-4349200	Weak transcription	Fetal Brain Male	brain
6	chr10:4344800-4345400	Enhancers	NHDF-Ad	bronchial
7	chr10:4345000-4345400	Enhancers	Muscle Satellite Cultured Cells	--
8	chr10:4345000-4345400	Enhancers	Fetal Lung	lung
9	chr10:4345000-4345600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr10:4345200-4345400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr10:4345200-4345400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr10:4345200-4345400	Enhancers	Psoas Muscle	Psoas
13	chr10:4345200-4345400	Enhancers	Skeletal Muscle Male	skeletal muscle
14	chr10:4345200-4345400	Enhancers	Skeletal Muscle Female	skeletal muscle

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