Variant report

Variant	rs7093134
Chromosome Location	chr10:4355922-4355923
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10904225	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10904226	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10904227	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11252451	0.85[AMR][1000 genomes]
rs11252457	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11252458	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11252459	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12765847	0.99[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12769562	0.82[AMR][1000 genomes]
rs12773994	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12777785	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1926786	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2182584	0.85[AMR][1000 genomes]
rs4307624	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4536111	0.80[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4579834	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4584477	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4881314	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4881316	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894785	chr10:4306421-4372629	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:4348200-4357200	Weak transcription	Fetal Muscle Leg	muscle
2	chr10:4349400-4357800	Weak transcription	Ovary	ovary
3	chr10:4349400-4357800	Weak transcription	Psoas Muscle	Psoas
4	chr10:4350400-4357200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr10:4350800-4358600	Weak transcription	Right Atrium	heart
6	chr10:4352800-4357400	Weak transcription	Skeletal Muscle Male	skeletal muscle
7	chr10:4352800-4357600	Weak transcription	Brain Germinal Matrix	brain
8	chr10:4353600-4358600	Weak transcription	Skeletal Muscle Female	skeletal muscle
9	chr10:4353800-4357400	Weak transcription	Fetal Heart	heart
10	chr10:4354400-4357600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr10:4355200-4356000	Enhancers	Fetal Lung	lung
12	chr10:4355600-4358000	Enhancers	Fetal Brain Male	brain
13	chr10:4355800-4359800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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