Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:44835745..44837877-chr12:44838477..44840498,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10506248	0.83[EUR][1000 genomes]
rs17094494	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17094615	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17094697	1.00[AFR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17121314	1.00[CHB][hapmap];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2068103	1.00[CHB][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55923007	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55956897	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57673436	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61035347	1.00[ASN][1000 genomes]
rs73094339	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73094354	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73096306	1.00[AFR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73096326	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73096328	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73096336	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7310784	1.00[CHB][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7310993	1.00[CHB][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74085178	1.00[ASN][1000 genomes]
rs7955106	1.00[CHB][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7958792	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049818	chr12:44486312-45133783	Enhancers ZNF genes & repeats Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:44823400-44839400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr12:44836200-44837400	Weak transcription	GM12878-XiMat	blood

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