Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10506248	0.83[EUR][1000 genomes]
rs11836369	0.82[AFR][1000 genomes]
rs17094494	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17094615	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17094697	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17121314	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1948461	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2068103	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55923007	0.87[AFR][1000 genomes];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55956897	0.82[AFR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57673436	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61035347	1.00[ASN][1000 genomes]
rs73094354	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73096306	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73096326	1.00[ASN][1000 genomes]
rs73096328	1.00[ASN][1000 genomes]
rs73096336	1.00[ASN][1000 genomes]
rs7310784	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7310993	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74085178	1.00[ASN][1000 genomes]
rs7955106	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7958792	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049818	chr12:44486312-45133783	Enhancers ZNF genes & repeats Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:44813400-44822400	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr12:44816800-44821800	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr12:44816800-44821800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr12:44816800-44822000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr12:44817000-44822400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr12:44819200-44819600	Enhancers	HepG2	liver

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