Variant report

Variant	rs195397
Chromosome Location	chr6:37315512-37315513
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs169007	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.85[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs195388	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs195389	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];1.00[ASN][1000 genomes]
rs195390	0.83[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];0.86[MEX][hapmap];0.91[MKK][hapmap];0.85[YRI][hapmap];0.88[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs195391	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.88[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs195396	0.88[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs195398	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs195400	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2295243	1.00[CHB][hapmap];0.89[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];1.00[ASN][1000 genomes]
rs3734327	1.00[CHB][hapmap];0.89[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];1.00[ASN][1000 genomes]
rs3734328	1.00[ASN][1000 genomes]
rs3734329	1.00[CHB][hapmap];0.89[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];1.00[ASN][1000 genomes]
rs6920004	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs6920456	1.00[ASN][1000 genomes]
rs6923752	1.00[CHB][hapmap];0.85[GIH][hapmap]
rs7758096	1.00[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];1.00[ASN][1000 genomes]
rs7761597	1.00[ASN][1000 genomes]
rs7768408	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7768797	1.00[ASN][1000 genomes]
rs9462299	1.00[ASN][1000 genomes]
rs9462300	1.00[ASN][1000 genomes]
rs9470554	1.00[CHB][hapmap]
rs9470557	1.00[ASN][1000 genomes]
rs9689746	0.92[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:37315200-37315800	Enhancers	iPS-15b Cell Line	embryonic stem cell
2	chr6:37315400-37316000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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