The 2.0 version of rSNPBase

Variant report

Variant rs195417
Chromosome Location chr6:37329001-37329002
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37323000-37330800 Weak transcription Placenta Placenta
2 chr6:37323000-37336600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr6:37323000-37336600 Weak transcription Pancreas Pancrea
4 chr6:37323000-37336600 Weak transcription Psoas Muscle Psoas
5 chr6:37323000-37351400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr6:37323200-37336600 Weak transcription Right Ventricle heart
7 chr6:37323200-37336800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr6:37323200-37336800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr6:37323400-37336200 Weak transcription Brain Germinal Matrix brain
10 chr6:37323400-37349800 Weak transcription Placenta Amnion Placenta Amnion
11 chr6:37323400-37356800 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr6:37323600-37329200 Weak transcription HMEC breast
13 chr6:37323600-37329200 Weak transcription NH-A brain
14 chr6:37323600-37336600 Weak transcription NHDF-Ad bronchial
15 chr6:37323600-37336800 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr6:37323600-37336800 Weak transcription Colonic Mucosa Colon
17 chr6:37323600-37336800 Weak transcription Colon Smooth Muscle Colon
18 chr6:37323800-37336800 Weak transcription Fetal Brain Male brain
19 chr6:37324000-37330000 Weak transcription Thymus Thymus
20 chr6:37324000-37336200 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr6:37324000-37336800 Weak transcription Fetal Kidney kidney
22 chr6:37324000-37366800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr6:37324200-37336000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr6:37324400-37336000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr6:37324600-37337200 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr6:37324800-37335600 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr6:37325200-37336600 Weak transcription Gastric stomach
28 chr6:37326000-37329200 Weak transcription Fetal Heart heart
29 chr6:37326200-37333800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr6:37326400-37336400 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr6:37326400-37336600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr6:37327000-37333000 Strong transcription K562 blood
33 chr6:37327000-37336600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr6:37327200-37331400 Strong transcription HUES6 Cell Line embryonic stem cell
35 chr6:37327200-37332800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr6:37327400-37329400 Weak transcription Primary hematopoietic stem cells blood
37 chr6:37327400-37331000 Strong transcription Fetal Muscle Leg muscle
38 chr6:37327400-37331200 Strong transcription Primary T regulatory cells fromperipheralblood blood
39 chr6:37327400-37331200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr6:37327400-37332600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr6:37327400-37333200 Weak transcription Pancreatic Islets Pancreatic Islet
42 chr6:37327400-37333400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr6:37327600-37331200 Strong transcription HepG2 liver
44 chr6:37327800-37330200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr6:37327800-37331000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr6:37327800-37332400 Strong transcription Primary hematopoietic stem cells short term culture blood
47 chr6:37327800-37332400 Strong transcription Primary T helper cells PMA-I stimulated --
48 chr6:37327800-37332600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr6:37327800-37333000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr6:37328000-37329600 Strong transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015