Variant report
Variant | rs1954908 |
---|---|
Chromosome Location | chr6:163116693-163116694 |
allele | A/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr6:163111769..163114753-chr6:163116374..163118174,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10455913 | 0.82[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs10806760 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs10806762 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs10806763 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs10945840 | 0.90[CHB][hapmap];0.85[JPT][hapmap] |
rs10945842 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs10945846 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs10945851 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs10945852 | 0.91[CHB][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap] |
rs10945854 | 0.82[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs10945856 | 0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs10945859 | 1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs10945860 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs11756579 | 0.91[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs12190823 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs12193969 | 0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs12194834 | 0.87[CHB][hapmap] |
rs12196897 | 0.87[CHB][hapmap];0.82[JPT][hapmap] |
rs12207841 | 0.83[CEU][hapmap];1.00[CHB][hapmap];0.96[JPT][hapmap];1.00[YRI][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12215884 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs1893119 | 0.83[CHB][hapmap];0.86[JPT][hapmap] |
rs1893537 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs1954804 | 0.91[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs1954805 | 0.83[CEU][hapmap];0.83[CHB][hapmap];0.96[JPT][hapmap];1.00[YRI][hapmap];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs1954909 | 0.87[ASN][1000 genomes] |
rs2022999 | 0.86[CHB][hapmap] |
rs2023014 | 0.89[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs2023016 | 0.91[CHB][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap] |
rs2023039 | 0.87[AMR][1000 genomes];0.93[ASN][1000 genomes] |
rs2105721 | 0.88[ASN][1000 genomes] |
rs2155503 | 0.81[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs2156258 | 0.83[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes] |
rs2803045 | 0.86[CHB][hapmap];0.86[JPT][hapmap] |
rs2803046 | 0.86[CHB][hapmap];0.86[JPT][hapmap] |
rs2803047 | 0.86[CHB][hapmap];0.86[JPT][hapmap] |
rs2803087 | 1.00[JPT][hapmap];0.88[ASN][1000 genomes] |
rs2803092 | 0.89[ASN][1000 genomes] |
rs2803097 | 0.83[CHB][hapmap];0.86[JPT][hapmap] |
rs2803103 | 0.83[CHB][hapmap];0.86[JPT][hapmap] |
rs2803108 | 0.83[CHB][hapmap];0.86[JPT][hapmap] |
rs2803115 | 0.83[CHB][hapmap];0.86[JPT][hapmap] |
rs2803118 | 0.87[CHB][hapmap];0.86[JPT][hapmap] |
rs2846507 | 0.82[JPT][hapmap] |
rs2846508 | 0.82[JPT][hapmap] |
rs2846515 | 0.83[CHB][hapmap];0.86[JPT][hapmap] |
rs2846517 | 0.86[CHB][hapmap];0.81[JPT][hapmap] |
rs2846528 | 0.86[CHB][hapmap];0.86[JPT][hapmap] |
rs2846529 | 0.86[CHB][hapmap];0.86[JPT][hapmap] |
rs2846533 | 0.83[CHB][hapmap];0.87[JPT][hapmap] |
rs2846556 | 0.91[CHB][hapmap] |
rs2846562 | 0.87[JPT][hapmap] |
rs2849530 | 0.89[ASN][1000 genomes] |
rs2849536 | 1.00[JPT][hapmap];0.88[ASN][1000 genomes] |
rs2849537 | 0.89[ASN][1000 genomes] |
rs2849538 | 0.88[ASN][1000 genomes] |
rs2849539 | 0.87[ASN][1000 genomes] |
rs2849541 | 0.88[ASN][1000 genomes] |
rs2849543 | 1.00[JPT][hapmap];0.85[ASN][1000 genomes] |
rs2849555 | 0.83[CHB][hapmap];0.95[JPT][hapmap] |
rs28868638 | 0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs4360108 | 0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs4425570 | 0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap] |
rs4554301 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs4708970 | 0.95[CHB][hapmap] |
rs4708971 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs4708972 | 0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs4709635 | 0.90[CHB][hapmap];0.81[JPT][hapmap] |
rs4709640 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs4709641 | 0.91[CHB][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap] |
rs58292605 | 0.91[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs6455843 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap] |
rs6941209 | 0.92[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs719650 | 0.83[CHB][hapmap];0.91[JPT][hapmap] |
rs7349868 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs7451729 | 0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs7451965 | 0.81[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs7454819 | 0.84[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs7746152 | 0.91[CHB][hapmap];0.81[JPT][hapmap] |
rs7755248 | 0.91[CHB][hapmap];0.81[JPT][hapmap] |
rs7773363 | 0.85[CHB][hapmap];0.81[JPT][hapmap] |
rs9295192 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs9295193 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs9295194 | 0.87[CHB][hapmap];0.82[JPT][hapmap] |
rs9346921 | 0.87[CHB][hapmap];0.82[JPT][hapmap] |
rs9346922 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs9346928 | 1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs9346929 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs9346933 | 0.83[CHB][hapmap] |
rs9347659 | 0.91[CHB][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap] |
rs9347660 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs9347662 | 0.91[CHB][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap] |
rs9347666 | 0.84[CHB][hapmap] |
rs9347667 | 0.86[CHB][hapmap];0.81[JPT][hapmap] |
rs9347680 | 0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs9347681 | 0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs9347683 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap] |
rs9347684 | 0.93[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs9347686 | 0.82[ASN][1000 genomes] |
rs9355398 | 0.91[CHB][hapmap];0.81[JPT][hapmap] |
rs9355399 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs9356032 | 0.83[CHB][hapmap] |
rs9356034 | 0.81[CHB][hapmap];0.82[JPT][hapmap] |
rs9356038 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs9356039 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs9356044 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs9356046 | 0.91[CHB][hapmap];1.00[YRI][hapmap] |
rs9356047 | 0.95[CHB][hapmap];0.85[JPT][hapmap] |
rs9356049 | 0.87[CHB][hapmap];0.82[JPT][hapmap] |
rs9356052 | 0.91[CHB][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap] |
rs9356053 | 0.83[CEU][hapmap];1.00[CHB][hapmap];0.96[JPT][hapmap];1.00[YRI][hapmap];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs9356054 | 0.83[CEU][hapmap];1.00[CHB][hapmap];0.96[JPT][hapmap];1.00[YRI][hapmap];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs9356057 | 1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs9364662 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs9364664 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs9364666 | 0.91[CHB][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap] |
rs9364667 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs9365460 | 0.90[CHB][hapmap];0.83[JPT][hapmap] |
rs9365464 | 0.90[CHB][hapmap];0.80[JPT][hapmap] |
rs9365465 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs9365467 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs9365471 | 0.87[CHB][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap] |
rs9365472 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs9365473 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs9365475 | 0.91[CHB][hapmap];1.00[YRI][hapmap] |
rs9365483 | 1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs9365484 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs9456795 | 0.89[CHB][hapmap];0.81[JPT][hapmap] |
rs9456797 | 0.83[CHB][hapmap];0.82[JPT][hapmap] |
rs9456802 | 0.89[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs9456805 | 0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap] |
rs9456811 | 0.81[ASN][1000 genomes] |
rs9458581 | 0.87[CHB][hapmap];0.82[JPT][hapmap] |
rs9458595 | 0.90[CHB][hapmap];0.82[JPT][hapmap] |
rs9458597 | 0.91[CHB][hapmap];0.82[JPT][hapmap] |
rs9458604 | 0.91[CHB][hapmap] |
rs9458609 | 0.82[CHB][hapmap];0.82[JPT][hapmap] |
rs9458610 | 0.86[CHB][hapmap];0.82[JPT][hapmap] |
rs9458612 | 0.86[CHB][hapmap];1.00[YRI][hapmap] |
rs9458616 | 0.84[CHB][hapmap];0.84[JPT][hapmap] |
rs9458619 | 1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs9458629 | 0.92[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs9458631 | 0.92[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs9458637 | 0.83[CEU][hapmap];0.95[CHB][hapmap];0.87[JPT][hapmap];1.00[YRI][hapmap];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs9458638 | 0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs9458639 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs9458641 | 1.00[AFR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs956005 | 0.83[CHB][hapmap];0.91[JPT][hapmap] |
rs957906 | 0.91[CHB][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv517562 | chr6:162481460-163249645 | Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
2 | nsv1018554 | chr6:162482580-163161112 | Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
3 | nsv533215 | chr6:162507055-163241611 | Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
4 | nsv1028092 | chr6:162519281-163194121 | Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Genic enhancers | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
5 | nsv538506 | chr6:162519281-163194121 | Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
6 | nsv1029151 | chr6:162582178-163125954 | Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
7 | nsv533366 | chr6:162584320-163241000 | Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
8 | nsv1025396 | chr6:162590018-163183563 | Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
9 | nsv481709 | chr6:162611340-163119381 | Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
10 | nsv870232 | chr6:162640581-163315481 | Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
11 | nsv1024378 | chr6:162643449-163161112 | Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
12 | nsv1021704 | chr6:162643449-163235776 | Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
13 | nsv538509 | chr6:162643449-163235776 | Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
14 | nsv917926 | chr6:162646457-163609259 | Enhancers Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
15 | nsv497870 | chr6:162654003-163129645 | Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
16 | nsv533843 | chr6:162654091-163241043 | Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
17 | nsv1018904 | chr6:162748287-163129724 | Enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
18 | nsv538517 | chr6:162748287-163129724 | Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
19 | nsv1030546 | chr6:162748287-163475085 | Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
20 | nsv538518 | chr6:162748287-163475085 | Transcr. at gene 5' and 3' Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
21 | nsv605159 | chr6:162800156-163479507 | Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
22 | nsv1022105 | chr6:162817344-163320793 | Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
23 | esv2757200 | chr6:162840922-163233261 | Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Bivalent Enhancer | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
24 | esv2759489 | chr6:162840922-163233261 | Weak transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Strong transcription Bivalent Enhancer | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
25 | esv2758091 | chr6:162858322-163140375 | Flanking Active TSS Enhancers Genic enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
26 | nsv1015507 | chr6:162865145-163334779 | Flanking Active TSS Genic enhancers Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
27 | nsv886890 | chr6:162871195-163248589 | Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
28 | nsv886905 | chr6:162928898-163284038 | Enhancers Active TSS Strong transcription ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
29 | nsv481693 | chr6:162935354-163162438 | Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
30 | nsv1029112 | chr6:162965483-163127021 | Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Active TSS Genic enhancers | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
31 | nsv538523 | chr6:162965483-163127021 | Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
32 | nsv932127 | chr6:163000261-163950870 | Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 13 gene(s) | inside rSNPs | diseases |
33 | nsv481960 | chr6:163016189-163240987 | Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Weak transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
34 | nsv481959 | chr6:163019491-163202495 | Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
35 | nsv1018573 | chr6:163025361-163172809 | Active TSS Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
36 | nsv481962 | chr6:163033886-163401583 | Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
37 | nsv481958 | chr6:163055766-163128534 | Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats | Chromatin interactive region | n/a | inside rSNPs | diseases |
38 | nsv830857 | chr6:163064811-163245813 | Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
39 | nsv886912 | chr6:163065019-163232332 | Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
40 | nsv886913 | chr6:163081812-163149497 | Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
41 | nsv605180 | chr6:163094923-163212299 | Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
42 | nsv1015155 | chr6:163095774-163361624 | Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
43 | nsv1032968 | chr6:163095774-163391548 | Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:163107000-163119200 | Weak transcription | Right Atrium | heart |
2 | chr6:163107400-163119200 | Weak transcription | Aorta | Aorta |
3 | chr6:163111000-163123400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
4 | chr6:163111000-163131600 | Weak transcription | Left Ventricle | heart |
5 | chr6:163111200-163119200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
6 | chr6:163111800-163118800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
7 | chr6:163111800-163122800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
8 | chr6:163113600-163127400 | Weak transcription | Ovary | ovary |
9 | chr6:163114400-163126800 | Weak transcription | Psoas Muscle | Psoas |