Variant report

Variant	rs4554301
Chromosome Location	chr6:163136837-163136838
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:163135428..163138047-chr6:163139216..163143407,3	K562	blood:
2	chr6:163136674..163141943-chr6:163143603..163148822,6	K562	blood:

Variant related genes	Relation type
ENSG00000185345	Chromatin interaction
ENSG00000112530	Chromatin interaction

Extended variants
information (count: 184 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:146)

rs_ID	r²[population]
rs10455913	0.82[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10806760	0.91[CHB][hapmap];0.81[JPT][hapmap]
rs10806762	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10806763	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10945840	0.90[CHB][hapmap];0.84[JPT][hapmap]
rs10945842	0.91[CHB][hapmap];0.82[JPT][hapmap]
rs10945846	0.91[CHB][hapmap];0.82[JPT][hapmap]
rs10945851	0.91[CHB][hapmap];0.82[JPT][hapmap]
rs10945852	0.91[CHB][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap]
rs10945854	0.82[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10945856	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10945859	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10945860	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11756579	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12190823	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12193969	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12194834	0.87[CHB][hapmap]
rs12196897	0.87[CHB][hapmap];0.82[JPT][hapmap]
rs12207841	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12215884	0.91[CHB][hapmap];0.82[JPT][hapmap]
rs1893119	0.83[CHB][hapmap];0.90[JPT][hapmap]
rs1893537	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1954804	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1954805	0.83[CEU][hapmap];0.83[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1954908	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1954909	0.85[ASN][1000 genomes]
rs2023014	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2023016	0.91[CHB][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap]
rs2023039	0.84[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs2105721	0.86[ASN][1000 genomes]
rs2156258	0.83[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs2803045	0.86[CHB][hapmap];0.90[JPT][hapmap]
rs2803046	0.86[CHB][hapmap];0.90[JPT][hapmap]
rs2803047	0.86[CHB][hapmap];0.90[JPT][hapmap]
rs2803087	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs2803092	0.87[ASN][1000 genomes]
rs2803097	0.83[CHB][hapmap];0.90[JPT][hapmap]
rs2803103	0.83[CHB][hapmap];0.90[JPT][hapmap]
rs2803108	0.83[CHB][hapmap];0.90[JPT][hapmap]
rs2803115	0.83[CHB][hapmap];0.91[JPT][hapmap]
rs2803118	0.87[CHB][hapmap];0.91[JPT][hapmap]
rs2846507	0.81[JPT][hapmap]
rs2846508	0.81[JPT][hapmap]
rs2846515	0.83[CHB][hapmap];0.90[JPT][hapmap]
rs2846517	0.86[CHB][hapmap];0.85[JPT][hapmap]
rs2846528	0.86[CHB][hapmap];0.90[JPT][hapmap]
rs2846529	0.86[CHB][hapmap];0.90[JPT][hapmap]
rs2846533	0.83[CHB][hapmap];0.91[JPT][hapmap]
rs2846556	0.91[CHB][hapmap]
rs2846562	0.91[JPT][hapmap]
rs2849530	0.87[ASN][1000 genomes]
rs2849536	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs2849537	0.87[ASN][1000 genomes]
rs2849538	0.86[ASN][1000 genomes]
rs2849539	0.85[ASN][1000 genomes]
rs2849541	0.86[ASN][1000 genomes]
rs2849543	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs2849555	0.83[CHB][hapmap];0.95[JPT][hapmap]
rs28868638	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4360108	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4425570	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs4708970	0.95[CHB][hapmap]
rs4708971	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4708972	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4709635	0.90[CHB][hapmap];0.81[JPT][hapmap]
rs4709640	0.91[CHB][hapmap];0.82[JPT][hapmap]
rs4709641	0.91[CHB][hapmap];0.81[JPT][hapmap];1.00[YRI][hapmap]
rs58292605	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6455843	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap]
rs6941209	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs719650	0.83[CHB][hapmap];0.95[JPT][hapmap]
rs7349868	0.91[CHB][hapmap];0.81[JPT][hapmap]
rs7451729	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7451965	0.81[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7454819	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7746152	0.91[CHB][hapmap];0.81[JPT][hapmap]
rs7755248	0.91[CHB][hapmap];0.81[JPT][hapmap]
rs7773363	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs9295192	0.91[CHB][hapmap];0.81[JPT][hapmap]
rs9295193	0.91[CHB][hapmap];0.82[JPT][hapmap]
rs9295194	0.87[CHB][hapmap];0.82[JPT][hapmap]
rs9346921	0.87[CHB][hapmap];0.82[JPT][hapmap]
rs9346922	0.91[CHB][hapmap];0.82[JPT][hapmap]
rs9346928	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9346929	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9346933	0.83[CHB][hapmap]
rs9347659	0.91[CHB][hapmap];0.81[JPT][hapmap];1.00[YRI][hapmap]
rs9347660	0.91[CHB][hapmap];0.82[JPT][hapmap]
rs9347662	0.91[CHB][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap]
rs9347666	0.84[CHB][hapmap]
rs9347667	0.86[CHB][hapmap];0.81[JPT][hapmap]
rs9347680	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9347681	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9347683	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap]
rs9347684	0.93[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9347686	0.85[ASN][1000 genomes]
rs9355398	0.91[CHB][hapmap];0.80[JPT][hapmap]
rs9355399	0.91[CHB][hapmap];0.82[JPT][hapmap]
rs9356032	0.83[CHB][hapmap]
rs9356034	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs9356038	0.91[CHB][hapmap];0.82[JPT][hapmap]
rs9356039	0.91[CHB][hapmap];0.82[JPT][hapmap]
rs9356044	0.91[CHB][hapmap];0.81[JPT][hapmap]
rs9356046	0.91[CHB][hapmap];1.00[YRI][hapmap]
rs9356047	0.95[CHB][hapmap];0.85[JPT][hapmap]
rs9356049	0.87[CHB][hapmap];0.82[JPT][hapmap]
rs9356052	0.91[CHB][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap]
rs9356053	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9356054	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9356057	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9364662	0.91[CHB][hapmap];0.81[JPT][hapmap]
rs9364664	0.91[CHB][hapmap];0.81[JPT][hapmap]
rs9364666	0.91[CHB][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap]
rs9364667	0.91[CHB][hapmap];0.81[JPT][hapmap]
rs9365460	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs9365464	0.90[CHB][hapmap]
rs9365465	0.91[CHB][hapmap];0.82[JPT][hapmap]
rs9365467	0.91[CHB][hapmap];0.82[JPT][hapmap]
rs9365471	0.87[CHB][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap]
rs9365472	0.91[CHB][hapmap];0.81[JPT][hapmap]
rs9365473	0.91[CHB][hapmap];0.81[JPT][hapmap]
rs9365475	0.91[CHB][hapmap];1.00[YRI][hapmap]
rs9365483	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9365484	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9456795	0.89[CHB][hapmap];0.81[JPT][hapmap]
rs9456797	0.83[CHB][hapmap];0.82[JPT][hapmap]
rs9456802	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9456805	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs9456811	0.85[ASN][1000 genomes]
rs9458581	0.87[CHB][hapmap];0.82[JPT][hapmap]
rs9458595	0.90[CHB][hapmap];0.81[JPT][hapmap]
rs9458597	0.91[CHB][hapmap];0.82[JPT][hapmap]
rs9458604	0.91[CHB][hapmap]
rs9458609	0.82[CHB][hapmap];0.81[JPT][hapmap]
rs9458610	0.86[CHB][hapmap];0.81[JPT][hapmap]
rs9458612	0.86[CHB][hapmap];1.00[YRI][hapmap]
rs9458616	0.84[CHB][hapmap];0.83[JPT][hapmap]
rs9458619	1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9458629	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9458631	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9458637	0.83[CEU][hapmap];0.95[CHB][hapmap];0.87[JPT][hapmap];1.00[YRI][hapmap];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9458638	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9458639	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9458641	1.00[AFR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs956005	0.83[CHB][hapmap];0.95[JPT][hapmap]
rs957906	0.91[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:38 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv517562	chr6:162481460-163249645	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv1018554	chr6:162482580-163161112	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv533215	chr6:162507055-163241611	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv1028092	chr6:162519281-163194121	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
5	nsv538506	chr6:162519281-163194121	Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
6	nsv533366	chr6:162584320-163241000	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
7	nsv1025396	chr6:162590018-163183563	Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
8	nsv870232	chr6:162640581-163315481	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
9	nsv1024378	chr6:162643449-163161112	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
10	nsv1021704	chr6:162643449-163235776	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
11	nsv538509	chr6:162643449-163235776	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
12	nsv917926	chr6:162646457-163609259	Enhancers Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
13	nsv533843	chr6:162654091-163241043	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
14	nsv1030546	chr6:162748287-163475085	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
15	nsv538518	chr6:162748287-163475085	Transcr. at gene 5' and 3' Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
16	nsv605159	chr6:162800156-163479507	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
17	nsv1022105	chr6:162817344-163320793	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
18	esv2757200	chr6:162840922-163233261	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
19	esv2759489	chr6:162840922-163233261	Weak transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
20	esv2758091	chr6:162858322-163140375	Flanking Active TSS Enhancers Genic enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
21	nsv1015507	chr6:162865145-163334779	Flanking Active TSS Genic enhancers Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
22	nsv886890	chr6:162871195-163248589	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
23	nsv886905	chr6:162928898-163284038	Enhancers Active TSS Strong transcription ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
24	nsv481693	chr6:162935354-163162438	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
25	nsv932127	chr6:163000261-163950870	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
26	nsv481960	chr6:163016189-163240987	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Weak transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
27	nsv481959	chr6:163019491-163202495	Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
28	nsv1018573	chr6:163025361-163172809	Active TSS Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
29	nsv481962	chr6:163033886-163401583	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
30	nsv830857	chr6:163064811-163245813	Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
31	nsv886912	chr6:163065019-163232332	Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
32	nsv886913	chr6:163081812-163149497	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
33	nsv605180	chr6:163094923-163212299	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
34	nsv1015155	chr6:163095774-163361624	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
35	nsv1032968	chr6:163095774-163391548	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
36	nsv529089	chr6:163129464-163516451	Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
37	nsv1026490	chr6:163133433-163705708	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
38	nsv481692	chr6:163134854-163155124	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:163119800-163138000	Weak transcription	Aorta	Aorta
2	chr6:163128000-163137800	Weak transcription	Fetal Brain Male	brain
3	chr6:163132800-163142400	Weak transcription	Psoas Muscle	Psoas
4	chr6:163133000-163138000	Weak transcription	Left Ventricle	heart
5	chr6:163133000-163142200	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr6:163133600-163138000	Weak transcription	Pancreas	Pancrea
7	chr6:163135000-163137000	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr6:163135600-163148200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr6:163135800-163140200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
10	chr6:163136400-163140400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr6:163136400-163140600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
12	chr6:163136800-163137000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr6:163136800-163137000	Enhancers	Ovary	ovary

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