Variant report

Variant	rs1959479
Chromosome Location	chr14:71089281-71089282
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:71088364..71089507-chr14:71284063..71285157,11	MCF-7	breast:
2	chr14:71088767..71089289-chr14:71179482..71180040,2	MCF-7	breast:
3	chr14:71088532..71090069-chr14:71180055..71181772,18	MCF-7	breast:
4	chr14:71088617..71089474-chr14:71180488..71181405,3	MCF-7	breast:

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11158873	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11621092	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11621756	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11622303	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes]
rs11623056	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11624163	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11625004	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11625581	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11626625	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11627570	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11629008	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11845123	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11848696	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs11849584	0.97[AMR][1000 genomes]
rs11849745	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs17176236	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17176306	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17176425	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17176459	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35847947	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56002948	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56393609	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73286045	0.97[AMR][1000 genomes]
rs8014596	0.91[AMR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:71085400-71091600	Weak transcription	HSMMtube	muscle
2	chr14:71086800-71091800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr14:71087400-71089800	Weak transcription	Primary B cells from cord blood	blood
4	chr14:71087800-71098800	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr14:71088800-71089400	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr14:71088800-71091800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr14:71089000-71089400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
8	chr14:71089200-71091400	Weak transcription	Primary B cells from peripheral blood	blood

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