Variant report

Variant rs1960268
Chromosome Location chr3:87023218-87023219
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:86998800-87036000 Weak transcription Psoas Muscle Psoas
2 chr3:87007200-87026600 Weak transcription Esophagus oesophagus
3 chr3:87007200-87038400 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr3:87008000-87028800 Weak transcription H1 Cell Line embryonic stem cell
5 chr3:87008000-87032000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr3:87008000-87034200 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr3:87011600-87026600 Weak transcription Rectal Smooth Muscle rectum
8 chr3:87012600-87032600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr3:87015000-87028400 Weak transcription H9 Cell Line embryonic stem cell
10 chr3:87015400-87027200 Weak transcription Hela-S3 cervix
11 chr3:87016200-87039000 Weak transcription Fetal Stomach stomach
12 chr3:87016800-87036800 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr3:87017000-87029400 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr3:87017600-87039000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr3:87018200-87026800 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr3:87018200-87032600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr3:87018200-87033600 Weak transcription A549 lung
18 chr3:87018400-87036400 Weak transcription Fetal Intestine Large intestine
19 chr3:87018600-87023400 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr3:87018600-87026400 Weak transcription Adipose Nuclei Adipose
21 chr3:87018600-87026400 Weak transcription Aorta Aorta
22 chr3:87018600-87026600 Weak transcription Pancreas Pancrea
23 chr3:87018600-87034200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr3:87019000-87025600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr3:87019200-87025200 Weak transcription Fetal Muscle Trunk muscle
26 chr3:87019400-87026200 Weak transcription Colon Smooth Muscle Colon
27 chr3:87019400-87036600 Weak transcription Fetal Brain Male brain
28 chr3:87019800-87026400 Weak transcription Ovary ovary
29 chr3:87020000-87024400 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr3:87020000-87026400 Weak transcription Fetal Muscle Leg muscle
31 chr3:87020400-87027200 Genic enhancers NHDF-Ad bronchial
32 chr3:87020800-87023400 Weak transcription NHLF lung
33 chr3:87021200-87023400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr3:87021800-87024600 Genic enhancers Osteobl bone
35 chr3:87021800-87024800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr3:87022000-87023800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr3:87022000-87024400 Genic enhancers HSMM muscle
38 chr3:87022400-87024400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr3:87022600-87023400 Strong transcription Fetal Lung lung
40 chr3:87022800-87023600 Enhancers Placenta Placenta
41 chr3:87022800-87028000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr3:87023000-87023600 Enhancers Placenta Amnion Placenta Amnion
43 chr3:87023000-87024800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr3:87023000-87026400 Strong transcription HSMMtube muscle
45 chr3:87023200-87023600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr3:87023200-87023800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr3:87023200-87023800 Weak transcription NH-A brain
48 chr3:87023200-87024200 Enhancers HUVEC blood vessel
49 chr3:87023200-87024400 Genic enhancers Muscle Satellite Cultured Cells --
50 chr3:87023200-87024400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin

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