Variant report

Variant rs1965839
Chromosome Location chr5:180284503-180284504
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180278200-180286400 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr5:180278400-180286600 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr5:180278400-180286800 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr5:180278400-180286800 Strong transcription Fetal Thymus thymus
5 chr5:180278400-180287000 Weak transcription Psoas Muscle Psoas
6 chr5:180278400-180287000 Weak transcription Right Ventricle heart
7 chr5:180278400-180287400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr5:180278400-180287400 Weak transcription Stomach Mucosa stomach
9 chr5:180278600-180286200 Weak transcription Brain Hippocampus Middle brain
10 chr5:180278600-180286400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr5:180278600-180286400 Weak transcription Hela-S3 cervix
12 chr5:180278600-180286600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr5:180278600-180287000 Weak transcription Brain Angular Gyrus brain
14 chr5:180278600-180287200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr5:180278800-180286200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr5:180278800-180286200 Weak transcription Fetal Heart heart
17 chr5:180278800-180286600 Weak transcription Muscle Satellite Cultured Cells --
18 chr5:180278800-180286800 Weak transcription Brain Cingulate Gyrus brain
19 chr5:180278800-180286800 Weak transcription Stomach Smooth Muscle stomach
20 chr5:180278800-180287000 Weak transcription Brain Substantia Nigra brain
21 chr5:180278800-180287400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr5:180278800-180287400 Weak transcription Small Intestine intestine
23 chr5:180279000-180285600 Strong transcription Dnd41 blood
24 chr5:180279000-180286200 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr5:180279000-180286400 Weak transcription NHDF-Ad bronchial
26 chr5:180279000-180287000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr5:180279000-180287000 Weak transcription NH-A brain
28 chr5:180279000-180287200 Weak transcription NHLF lung
29 chr5:180279200-180285400 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr5:180279800-180286600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr5:180279800-180286800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr5:180280000-180286200 Strong transcription K562 blood
33 chr5:180280200-180287200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr5:180280800-180285800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr5:180281000-180286600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr5:180281200-180286000 Weak transcription Fetal Brain Male brain
37 chr5:180281200-180286400 Strong transcription Primary T regulatory cells fromperipheralblood blood
38 chr5:180281400-180287200 Weak transcription Right Atrium heart
39 chr5:180281600-180286400 Strong transcription Primary T cells fromperipheralblood blood
40 chr5:180281800-180284800 Strong transcription Brain Germinal Matrix brain
41 chr5:180281800-180286200 Strong transcription Fetal Lung lung
42 chr5:180281800-180286400 Strong transcription A549 lung
43 chr5:180282200-180286200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr5:180282200-180286200 Strong transcription Fetal Adrenal Gland Adrenal Gland
45 chr5:180282200-180286200 Strong transcription Fetal Muscle Leg muscle
46 chr5:180282400-180284600 ZNF genes & repeats Fetal Stomach stomach
47 chr5:180282400-180284600 Strong transcription Sigmoid Colon Sigmoid Colon
48 chr5:180283200-180285600 Weak transcription Aorta Aorta
49 chr5:180283200-180285600 Weak transcription HSMM muscle
50 chr5:180283200-180285800 Weak transcription Thymus Thymus

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