Variant report

Variant rs249317
Chromosome Location chr5:180272935-180272936
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180259400-180273600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr5:180259800-180276800 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr5:180260000-180273200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr5:180260000-180273800 Weak transcription Fetal Kidney kidney
5 chr5:180260000-180274400 Weak transcription Muscle Satellite Cultured Cells --
6 chr5:180260000-180274400 Weak transcription NHDF-Ad bronchial
7 chr5:180260000-180276200 Weak transcription Stomach Mucosa stomach
8 chr5:180262400-180276200 Weak transcription Psoas Muscle Psoas
9 chr5:180262600-180276200 Weak transcription HSMMtube muscle
10 chr5:180263200-180273200 Weak transcription Fetal Intestine Large intestine
11 chr5:180263200-180274600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr5:180264000-180275600 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr5:180264000-180275800 Weak transcription Colonic Mucosa Colon
14 chr5:180264200-180273000 Weak transcription Lung lung
15 chr5:180264400-180275600 Weak transcription NHLF lung
16 chr5:180264400-180275800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr5:180264600-180273000 Weak transcription HSMM muscle
18 chr5:180264600-180273200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr5:180264600-180273200 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr5:180264600-180273400 Weak transcription Rectal Smooth Muscle rectum
21 chr5:180264600-180274000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr5:180264600-180274400 Weak transcription Dnd41 blood
23 chr5:180264600-180274600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr5:180264600-180275600 Weak transcription Colon Smooth Muscle Colon
25 chr5:180264600-180275600 Weak transcription Placenta Amnion Placenta Amnion
26 chr5:180264600-180275800 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr5:180264600-180275800 Weak transcription Spleen Spleen
28 chr5:180264600-180276200 Weak transcription Fetal Brain Male brain
29 chr5:180264800-180273200 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr5:180264800-180274000 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr5:180264800-180275600 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr5:180264800-180276000 Weak transcription Gastric stomach
33 chr5:180264800-180277200 Weak transcription HepG2 liver
34 chr5:180265000-180274800 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr5:180265000-180274800 Weak transcription Duodenum Mucosa Duodenum
36 chr5:180265000-180275200 Weak transcription Right Ventricle heart
37 chr5:180265000-180275800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr5:180265200-180273000 Weak transcription Placenta Placenta
39 chr5:180265200-180273200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr5:180265200-180275600 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr5:180265200-180276000 Weak transcription Brain Anterior Caudate brain
42 chr5:180265400-180273000 Weak transcription Esophagus oesophagus
43 chr5:180265400-180273600 Weak transcription Adipose Nuclei Adipose
44 chr5:180265400-180274200 Weak transcription Primary B cells from cord blood blood
45 chr5:180265400-180275400 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr5:180265400-180275400 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr5:180265400-180275600 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr5:180265400-180276000 Weak transcription Primary T killer naive cells fromperipheralblood blood
49 chr5:180265400-180276000 Weak transcription Brain Angular Gyrus brain
50 chr5:180265400-180276000 Weak transcription Left Ventricle heart

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