The 2.0 version of rSNPBase

Variant report

Variant rs1967875
Chromosome Location chr9:13136567-13136568
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:13097800-13139400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr9:13101600-13141600 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr9:13103200-13137200 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr9:13103200-13143400 Weak transcription Pancreas Pancrea
5 chr9:13103200-13163400 Weak transcription H9 Cell Line embryonic stem cell
6 chr9:13103200-13175600 Weak transcription HepG2 liver
7 chr9:13103800-13139400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr9:13104400-13137200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr9:13105600-13144600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr9:13106000-13153400 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr9:13106600-13139200 Weak transcription NHEK skin
12 chr9:13109200-13138800 Weak transcription Spleen Spleen
13 chr9:13109200-13139400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr9:13112200-13143600 Weak transcription Gastric stomach
15 chr9:13114600-13139200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr9:13114600-13139400 Weak transcription NHDF-Ad bronchial
17 chr9:13116000-13139800 Strong transcription Liver Liver
18 chr9:13118000-13139000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr9:13118200-13138800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr9:13118400-13139600 Strong transcription Breast Myoepithelial Primary Cells Breast
21 chr9:13118800-13139600 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr9:13118800-13139800 Weak transcription ES-WA7 Cell Line embryonic stem cell
23 chr9:13119000-13137200 Weak transcription Esophagus oesophagus
24 chr9:13121600-13225200 Weak transcription Placenta Amnion Placenta Amnion
25 chr9:13121800-13139800 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr9:13122600-13186400 Weak transcription Primary hematopoietic stem cells blood
27 chr9:13127800-13138600 Weak transcription Colonic Mucosa Colon
28 chr9:13128400-13139400 Strong transcription HUES64 Cell Line embryonic stem cell
29 chr9:13128600-13137400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr9:13129400-13138800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr9:13130000-13138800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr9:13130200-13139000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr9:13130400-13136800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr9:13130400-13137200 Strong transcription Ovary ovary
35 chr9:13130400-13138400 Strong transcription Osteobl bone
36 chr9:13130400-13139400 Strong transcription Stomach Smooth Muscle stomach
37 chr9:13130800-13137000 Strong transcription Left Ventricle heart
38 chr9:13130800-13138200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr9:13130800-13138400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr9:13130800-13139400 Strong transcription Fetal Muscle Leg muscle
41 chr9:13130800-13139400 Strong transcription HSMM muscle
42 chr9:13131200-13137000 Strong transcription Cortex derived primary cultured neurospheres brain
43 chr9:13131200-13139600 Strong transcription Fetal Intestine Large intestine
44 chr9:13131200-13140200 Strong transcription Skeletal Muscle Female skeletal muscle
45 chr9:13131400-13139000 Strong transcription Adipose Nuclei Adipose
46 chr9:13131400-13140000 Strong transcription Fetal Muscle Trunk muscle
47 chr9:13131800-13138600 Strong transcription Fetal Brain Female brain
48 chr9:13132000-13136600 Strong transcription Brain Anterior Caudate brain
49 chr9:13132000-13140000 Strong transcription iPS-20b Cell Line embryonic stem cell
50 chr9:13132200-13136600 Strong transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015