The 2.0 version of rSNPBase

Variant report

Variant rs2039333
Chromosome Location chr9:13205264-13205265
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:13121600-13225200 Weak transcription Placenta Amnion Placenta Amnion
2 chr9:13135400-13223600 Weak transcription Lung lung
3 chr9:13145400-13228600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr9:13164200-13248600 Weak transcription H9 Cell Line embryonic stem cell
5 chr9:13164200-13258800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr9:13182200-13226800 Weak transcription Fetal Brain Male brain
7 chr9:13186400-13212000 Weak transcription Gastric stomach
8 chr9:13188000-13220800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr9:13189000-13221000 Weak transcription NHLF lung
10 chr9:13189000-13268600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr9:13190400-13237800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr9:13195400-13223400 Weak transcription Fetal Stomach stomach
13 chr9:13199400-13210600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr9:13200200-13206200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr9:13200600-13206000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr9:13201200-13207200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr9:13201400-13206000 Strong transcription HSMM muscle
18 chr9:13201400-13206000 Strong transcription NH-A brain
19 chr9:13201400-13206400 Strong transcription iPS-20b Cell Line embryonic stem cell
20 chr9:13201400-13208400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr9:13201800-13206400 Strong transcription HUES64 Cell Line embryonic stem cell
22 chr9:13201800-13206400 Strong transcription Osteobl bone
23 chr9:13202000-13206000 Strong transcription Brain Angular Gyrus brain
24 chr9:13202000-13206400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr9:13202200-13206200 Strong transcription iPS-18 Cell Line embryonic stem cell
26 chr9:13202200-13206600 Strong transcription Skeletal Muscle Female skeletal muscle
27 chr9:13202400-13206000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr9:13202400-13206200 Strong transcription HUES48 Cell Line embryonic stem cell
29 chr9:13202600-13205400 Weak transcription Aorta Aorta
30 chr9:13202800-13215600 Weak transcription H1 Cell Line embryonic stem cell
31 chr9:13202800-13220800 Weak transcription Placenta Placenta
32 chr9:13202800-13226400 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr9:13202800-13250600 Weak transcription Pancreas Pancrea
34 chr9:13202800-13250800 Weak transcription Psoas Muscle Psoas
35 chr9:13203000-13205600 Weak transcription Fetal Kidney kidney
36 chr9:13203000-13209000 Weak transcription Fetal Heart heart
37 chr9:13203000-13209400 Weak transcription Muscle Satellite Cultured Cells --
38 chr9:13203000-13223600 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr9:13203000-13224800 Weak transcription Primary hematopoietic stem cells blood
40 chr9:13203000-13225400 Weak transcription Brain Anterior Caudate brain
41 chr9:13203000-13261000 Weak transcription Colon Smooth Muscle Colon
42 chr9:13203200-13205400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr9:13203200-13209400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr9:13203200-13214400 Weak transcription Fetal Brain Female brain
45 chr9:13203400-13208800 Weak transcription Adipose Nuclei Adipose
46 chr9:13203400-13211000 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr9:13203400-13214000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr9:13203400-13223600 Weak transcription Ovary ovary
49 chr9:13203400-13224800 Weak transcription Rectal Smooth Muscle rectum
50 chr9:13203400-13226400 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015