The 2.0 version of rSNPBase

Variant report

Variant rs10122232
Chromosome Location chr9:13202401-13202402
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:13121600-13225200 Weak transcription Placenta Amnion Placenta Amnion
2 chr9:13135400-13223600 Weak transcription Lung lung
3 chr9:13145400-13203200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr9:13145400-13228600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr9:13164200-13248600 Weak transcription H9 Cell Line embryonic stem cell
6 chr9:13164200-13258800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr9:13175800-13203000 Weak transcription Fetal Intestine Small intestine
8 chr9:13176400-13202600 Weak transcription Duodenum Mucosa Duodenum
9 chr9:13182000-13203400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr9:13182200-13203200 Weak transcription HMEC breast
11 chr9:13182200-13226800 Weak transcription Fetal Brain Male brain
12 chr9:13186400-13212000 Weak transcription Gastric stomach
13 chr9:13188000-13220800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr9:13188800-13203200 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr9:13189000-13221000 Weak transcription NHLF lung
16 chr9:13189000-13268600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr9:13190400-13237800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr9:13192200-13202800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr9:13195400-13203200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr9:13195400-13223400 Weak transcription Fetal Stomach stomach
21 chr9:13199400-13210600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr9:13200200-13206200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr9:13200600-13206000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr9:13200800-13203200 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr9:13200800-13203200 Weak transcription NHEK skin
26 chr9:13201000-13204600 Strong transcription Cortex derived primary cultured neurospheres brain
27 chr9:13201200-13207200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr9:13201400-13202800 Strong transcription Psoas Muscle Psoas
29 chr9:13201400-13202800 Strong transcription HUVEC blood vessel
30 chr9:13201400-13204400 Strong transcription Fetal Muscle Leg muscle
31 chr9:13201400-13204800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr9:13201400-13206000 Strong transcription HSMM muscle
33 chr9:13201400-13206000 Strong transcription NH-A brain
34 chr9:13201400-13206400 Strong transcription iPS-20b Cell Line embryonic stem cell
35 chr9:13201400-13208400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr9:13201600-13202800 Strong transcription Fetal Heart heart
37 chr9:13201800-13202800 Strong transcription H1 Cell Line embryonic stem cell
38 chr9:13201800-13203000 Strong transcription Colon Smooth Muscle Colon
39 chr9:13201800-13203400 Strong transcription Adipose Nuclei Adipose
40 chr9:13201800-13206400 Strong transcription HUES64 Cell Line embryonic stem cell
41 chr9:13201800-13206400 Strong transcription Osteobl bone
42 chr9:13202000-13203000 Strong transcription Muscle Satellite Cultured Cells --
43 chr9:13202000-13203000 Strong transcription Brain Anterior Caudate brain
44 chr9:13202000-13203000 Strong transcription Fetal Adrenal Gland Adrenal Gland
45 chr9:13202000-13203200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr9:13202000-13203200 Strong transcription Fetal Lung lung
47 chr9:13202000-13203400 Strong transcription Rectal Smooth Muscle rectum
48 chr9:13202000-13203600 Strong transcription HSMMtube muscle
49 chr9:13202000-13203800 Strong transcription Fetal Muscle Trunk muscle
50 chr9:13202000-13204000 Strong transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015