The 2.0 version of rSNPBase

Variant report

Variant rs13296638
Chromosome Location chr9:13242448-13242449
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:13164200-13248600 Weak transcription H9 Cell Line embryonic stem cell
2 chr9:13164200-13258800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr9:13189000-13268600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr9:13202800-13250600 Weak transcription Pancreas Pancrea
5 chr9:13202800-13250800 Weak transcription Psoas Muscle Psoas
6 chr9:13203000-13261000 Weak transcription Colon Smooth Muscle Colon
7 chr9:13203400-13247000 Weak transcription Brain Cingulate Gyrus brain
8 chr9:13203600-13245600 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr9:13204000-13249200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr9:13204200-13244600 Weak transcription HepG2 liver
11 chr9:13206000-13247000 Weak transcription Brain Angular Gyrus brain
12 chr9:13208200-13265000 Weak transcription Aorta Aorta
13 chr9:13209800-13266000 Weak transcription Muscle Satellite Cultured Cells --
14 chr9:13216600-13247000 Weak transcription Fetal Brain Female brain
15 chr9:13217000-13244200 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr9:13219800-13265600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr9:13221600-13244200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr9:13221600-13245400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr9:13221800-13242800 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr9:13221800-13246600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr9:13222600-13246200 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr9:13224000-13264600 Weak transcription Osteobl bone
23 chr9:13224200-13245600 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr9:13224400-13242600 Weak transcription Fetal Lung lung
25 chr9:13224400-13252400 Weak transcription Liver Liver
26 chr9:13224600-13247000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr9:13226000-13252800 Weak transcription Fetal Heart heart
28 chr9:13226400-13247000 Weak transcription Stomach Smooth Muscle stomach
29 chr9:13226600-13242600 Weak transcription Left Ventricle heart
30 chr9:13226600-13259200 Weak transcription Right Ventricle heart
31 chr9:13226800-13278000 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr9:13229400-13247200 Weak transcription HSMMtube muscle
33 chr9:13232400-13264800 Weak transcription NH-A brain
34 chr9:13233800-13255400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr9:13235600-13244000 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr9:13235800-13247200 Weak transcription Brain Germinal Matrix brain
37 chr9:13236400-13248000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr9:13236400-13264400 Weak transcription Fetal Intestine Small intestine
39 chr9:13236600-13251600 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr9:13237400-13247000 Weak transcription Brain Inferior Temporal Lobe brain
41 chr9:13238000-13264800 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr9:13238400-13247600 Weak transcription Lung lung
43 chr9:13238400-13254600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr9:13238600-13246800 Weak transcription Adipose Nuclei Adipose
45 chr9:13238600-13251200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr9:13240000-13278000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr9:13240200-13253400 Weak transcription Placenta Placenta
48 chr9:13240200-13255600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr9:13240400-13247200 Weak transcription H1 Cell Line embryonic stem cell
50 chr9:13240400-13251400 Weak transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015