Variant report

Variant	rs1970629
Chromosome Location	chr10:44890911-44890912
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs1106559	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1106560	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1108537	0.98[ASN][1000 genomes]
rs1855531	1.00[ASN][1000 genomes]
rs2002194	0.95[ASN][1000 genomes]
rs2093684	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35625505	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35669959	1.00[ASN][1000 genomes]
rs4520555	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4534529	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs56221135	1.00[ASN][1000 genomes]
rs6593412	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs68005969	1.00[ASN][1000 genomes]
rs945056	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44886600-44891000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:44886600-44892000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr10:44888000-44891000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr10:44889800-44891800	Weak transcription	Fetal Kidney	kidney
5	chr10:44890000-44891200	Weak transcription	Liver	Liver
6	chr10:44890400-44891000	Enhancers	Fetal Lung	lung
7	chr10:44890600-44891400	Enhancers	Rectal Mucosa Donor 29	rectum
8	chr10:44890800-44891000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr10:44890800-44891600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr10:44890800-44891600	Enhancers	Pancreas	Pancrea
11	chr10:44890800-44891800	Enhancers	HUES6 Cell Line	embryonic stem cell
12	chr10:44890800-44893200	Bivalent Enhancer	Fetal Muscle Trunk	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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