Variant report

Variant	rs68005969
Chromosome Location	chr10:44890106-44890107
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1106559	1.00[ASN][1000 genomes]
rs1106560	0.99[ASN][1000 genomes]
rs1108537	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1855531	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1970629	1.00[ASN][1000 genomes]
rs2002194	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2093684	0.98[ASN][1000 genomes]
rs35625505	0.95[ASN][1000 genomes]
rs35669959	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4520555	1.00[ASN][1000 genomes]
rs4534529	0.97[ASN][1000 genomes]
rs56221135	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6593412	1.00[ASN][1000 genomes]
rs754618	0.82[AFR][1000 genomes]
rs945056	1.00[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44886600-44891000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:44886600-44892000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr10:44888000-44891000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr10:44888400-44890600	Enhancers	Fetal Intestine Small	intestine
5	chr10:44888800-44890400	Enhancers	Rectal Mucosa Donor 31	rectum
6	chr10:44889200-44890400	Weak transcription	Fetal Lung	lung
7	chr10:44889800-44890600	Weak transcription	Colon Smooth Muscle	Colon
8	chr10:44889800-44890600	Weak transcription	Rectal Mucosa Donor 29	rectum
9	chr10:44889800-44891800	Weak transcription	Fetal Kidney	kidney
10	chr10:44890000-44890400	Weak transcription	Colonic Mucosa	Colon
11	chr10:44890000-44891200	Weak transcription	Liver	Liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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